RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CCDC116Q8IYX3 515 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 WDR77Q9BQA1 342 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 GPATCH1Q9BRR8 931 aaKnown RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 CRNNQ9UBG3 495 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 TULP3O75386 442 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 IFNA6P05013 189 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CHRM1P11229 460 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 PEX2P28328 305 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 OLR1P78380 273 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 IL18R1Q13478 541 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CEACAM20Q6UY09 585 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 B3GNT6Q6ZMB0 384 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 TSPAN33Q86UF1 283 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 TICAM1Q8IUC6 712 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CILP2Q8IUL8 1156 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 OR9A1PQ8NGU1 263 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 C11orf24Q96F05 449 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 FAM124BQ9H5Z6 455 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 GPX6P59796 221 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 DSTNP60981 165 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CBX3Q13185 183 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 PAFAH1B3Q15102 231 aaKnown RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 ZNF311Q5JNZ3 666 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 ITM2CQ9NQX7 267 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 COMMD3-BMI1R4GMX3 469 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CACNA1SQ13698 1873 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 PTGESO14684 152 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 GSTT1P30711 240 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 INCA1Q0VD86 236 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 SLCO6A1Q86UG4 719 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 RPLP0P6Q8NHW5 317 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 COX4I2Q96KJ9 171 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 DZANK1Q9NVP4 752 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 PLD2O14939 933 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 TLX3O43711 291 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 LYNP07948 512 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 G6PDP11413 515 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 ZNF30P17039 623 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 SOX9P48436 509 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CLCN4P51793 760 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 ADARP55265 1226 aaKnown RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 TAB1Q15750 504 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 LRRTM3Q86VH5 581 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 PLD6Q8N2A8 252 aaKnown RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 ZNF611Q8N823 705 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CHST14Q8NCH0 376 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 PROKR2Q8NFJ6 384 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 KBTBD7Q8WVZ9 684 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 HIST1H2AAQ96QV6 131 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 CHID1Q9BWS9 393 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 ZNF576Q9H609 170 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 MKKSQ9NPJ1 570 aaPredicted RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 CALML5Q9NZT1 146 aa9.45□□□□□ -0.9
SNX13-203ENST00000428135 APOBEC3BQ9UH17 382 aaKnown RBP9.45□□□□□ -0.9
SNX13-203ENST00000428135 LOC110117498-PIK3R3F6TDL0 507 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 TBX1O43435 398 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 RGS10O43665 173 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 SOX14O95416 240 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PDHA2P29803 388 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 AFF1P51825 1210 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 SHHQ15465 462 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 ASTE1Q2TB18 679 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 CRB2Q5IJ48 1285 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 CMTR2Q8IYT2 770 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 KBTBD8Q8NFY9 601 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 RLN3Q8WXF3 142 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 DSN1Q9H410 356 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MEAF6Q9HAF1 191 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 OXSMQ9NWU1 459 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 HYKKA2RU49 373 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PDLIM1O00151 329 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 RPS9P46781 194 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 ERVK-8P63133 956 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MAPK14Q16539 360 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 ALG1LQ6GMV1 187 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 OR4N5Q8IXE1 308 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 OXR1Q8N573 874 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 FAM3CQ92520 227 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 TOP1MTQ969P6 601 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 NSUN5Q96P11 429 aaKnown RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 DKKL1Q9UK85 242 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 ATXN7L1Q9ULK2 861 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 PTGDR2Q9Y5Y4 395 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 NUP188Q5SRE5 1749 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 SCO2O43819 266 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 CEBPBP17676 345 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 MAGEA11P43364 429 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 GMFBP60983 142 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 ELOCQ15369 112 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 USP30Q70CQ3 517 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 UBQLNLQ8IYU4 475 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 TTLQ8NG68 377 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 HTRA1Q92743 480 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 NOX1Q9Y5S8 564 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 UBE2QL1A1L167 161 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 A6NCN8 305 aa9.44□□□□□ -0.9
SNX13-203ENST00000428135 PTX3P26022 381 aaPredicted RBP9.44□□□□□ -0.9
SNX13-203ENST00000428135 ACADLP28330 430 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms