RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 OR51V1Q9H2C8 321 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 PRDM12Q9H4Q4 367 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 LMAN1LQ9HAT1 526 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 BATF3Q9NR55 127 aa5.59□□□□□ -1.52
HERC4-206ENST00000427635 A0A1B0GVC2 190 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ANKRD28O15084 1053 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 NME6O75414 186 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 TNFRSF21O75509 655 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 RAB36O95755 333 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 IFNGR1P15260 489 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 SSTP61278 116 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 TXNL4AP83876 142 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 GTF2BQ00403 316 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 MAMLD1Q13495 774 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 RBMS3Q6XE24 437 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 AKAP14Q86UN6 197 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZCCHC9Q8N567 271 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 METTL27Q8N6F8 245 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 GOLM1Q8NBJ4 401 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR6C4Q8NGE1 309 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR8S1Q8NH09 359 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR14L1PQ8NHC6 308 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 DAZLQ92904 295 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 C1GALT1C1Q96EU7 318 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR10A4Q9H209 315 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 GBA3Q9H227 469 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 FAM124BQ9H5Z6 455 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 METTL8Q9H825 291 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 ITM2CQ9NQX7 267 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 APOBEC3BQ9UH17 382 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ARL5AQ9Y689 179 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 MYO3AQ8NEV4 1616 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 VWDEQ8N2E2 1590 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 NOS1APO75052 506 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 DNAJB6O75190 326 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ATG12O94817 140 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 BCKDHAP12694 445 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 PBX3P40426 434 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 CDK9P50750 372 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 AFF1P51825 1210 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 NR0B1P51843 470 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 RRADP55042 308 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 EEFSECP57772 596 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 LMAN2Q12907 356 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 CTBP1Q13363 440 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 LRRC73Q5JTD7 316 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 LRRC66Q68CR7 880 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ADGRD2Q7Z7M1 963 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 LRRTM3Q86VH5 581 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR9K2Q8NGE7 335 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 C16orf58Q96GQ5 468 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 NECAB3Q96P71 396 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 PAPOLGQ9BWT3 736 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 DNTTIP1Q9H147 329 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 LIN28AQ9H9Z2 209 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZDHHC3Q9NYG2 299 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 P2RX2Q9UBL9 471 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 IL20RAQ9UHF4 553 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 PCDHAC2Q9Y5I4 1007 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 GNAZP19086 355 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 IL32P24001 234 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 CXCL12P48061 93 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 EIF5AP63241 154 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 RNF111Q6ZNA4 994 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 C15orf52Q6ZUT6 534 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZNF283Q8N7M2 679 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZBTB44Q8NCP5 570 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ADAMTS18Q8TE60 1221 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 THAP3Q8WTV1 239 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 RAB7BQ96AH8 199 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 FAM163AQ96GL9 167 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 TSSK3Q96PN8 268 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR2M4Q96R27 311 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 WDR24Q96S15 920 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 CITED2Q99967 270 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 G6PC3Q9BUM1 346 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZNF471Q9BX82 626 aaPredicted RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 EBPLQ9BY08 206 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 PDZD7Q9H5P4 517 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 IL21RQ9HBE5 538 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 HRASLS2Q9NWW9 162 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 PIK3C2BO00750 1634 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 OR14I1A6ND48 311 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 HHLA1C9JL84 531 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 M0R2N6 131 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 SLC30A4O14863 429 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ERI3O43414 337 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 DCXO43602 365 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 GYPCP04921 128 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZNF28P17035 718 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 GRIA3P42263 894 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 PTGER3P43115 390 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 DSC2Q02487 901 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ACY1Q03154 408 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 AUHQ13825 339 aaKnown RBP5.58□□□□□ -1.52
HERC4-206ENST00000427635 NKAPLQ5M9Q1 402 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 FAM131AQ6UXB0 335 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 NXPE1Q8N323 547 aa5.58□□□□□ -1.52
HERC4-206ENST00000427635 ZNF676Q8N7Q3 588 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms