RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 SMN1Q16637 294 aaKnown RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ZNF284Q2VY69 593 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CYP27C1Q4G0S4 372 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 C16orf87Q6PH81 154 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 FKBP9P1Q75LS8 142 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 OR7G3Q8NG95 312 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 THAP11Q96EK4 314 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SAGE1Q9NXZ1 904 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SH3BP4Q9P0V3 963 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 WARS2Q9UGM6 360 aaKnown RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 IL36AQ9UHA7 158 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 WASH3PC4AMC7 463 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 EIF3FO00303 357 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ABCB7O75027 752 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 PSIP1O75475 530 aaKnown RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 RECQL5O94762 991 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 INMTO95050 263 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 EPN2O95208 641 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CPNE6O95741 557 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 OPN1SWP03999 348 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ANXA4P09525 319 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ZNF30P17039 623 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CEBPBP17676 345 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 MAPK1P28482 360 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CRYBA2P53672 197 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 MLLT10P55197 1068 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 MC1RQ01726 317 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 MTAPQ13126 283 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SP140Q13342 867 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 TMED1Q13445 227 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 STARD3Q14849 445 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 VMACQ2NL98 169 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 LDLRAP1Q5SW96 308 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ANGPTL8Q6UXH0 198 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 TECPR1Q7Z6L1 1165 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ALDH16A1Q8IZ83 802 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SVOPLQ8N434 492 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CSGALNACT1Q8TDX6 532 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 NXPE3Q969Y0 559 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 OSBPL6Q9BZF3 934 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 OR2AG1Q9H205 316 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SPNS1Q9H2V7 528 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 TPT1P8Q9HAU6 139 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SPATA6Q9NWH7 488 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SIRT5Q9NXA8 310 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 TCF20Q9UGU0 1960 aaKnown RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 GNG14A0A1W2PPG7 69 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 BCKDKO14874 412 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 PRPH2P23942 346 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 IGFBP5P24593 272 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 VIPR2P41587 438 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 PLA2G16P53816 162 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ZNF385BQ569K4 471 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.22□□□□□ -0.613e-11■■■■■ 45.7
FIRRE-201ENST00000427391 SYTL1Q8IYJ3 562 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CFAP206Q8IYR0 622 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 TRAM1L1Q8N609 369 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ZNF740Q8NDX6 193 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 ABTB1Q969K4 478 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 DUSP26Q9BV47 211 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 GALNT8Q9NY28 637 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 USE1Q9NZ43 259 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 RAPGEFL1Q9UHV5 662 aa11.22□□□□□ -0.61
FIRRE-201ENST00000427391 FAF1Q9UNN5 650 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 PCYT1BQ9Y5K3 369 aaPredicted RBP11.22□□□□□ -0.61
FIRRE-201ENST00000427391 SLC1A7O00341 560 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 SPINT1O43278 529 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 KDELR2P33947 212 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 MMP12P39900 470 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 NUP107P57740 925 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 NFATC3Q12968 1075 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 ZNF805Q5CZA5 627 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 ZDHHC20Q5W0Z9 365 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 OR2T5Q6IEZ7 315 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 Q6ZPB1 254 aaPredicted RBP11.21□□□□□ -0.61
FIRRE-201ENST00000427391 GALNT13Q8IUC8 556 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 TRAPPC5Q8IUR0 188 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 RASGRP3Q8IV61 690 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 MMP21Q8N119 569 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 OR2T29Q8NH02 315 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 ZNF480Q8WV37 535 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 SNRNP27Q8WVK2 155 aaKnown RBP11.21□□□□□ -0.61
FIRRE-201ENST00000427391 POF1BQ8WVV4 589 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 RSPRY1Q96DX4 576 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 DTNBP1Q96EV8 351 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 CCDC138Q96M89 665 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 DOK1Q99704 481 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 ZSCAN5AQ9BUG6 496 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 C3orf18Q9UK00 162 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 ACSL6Q9UKU0 697 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 PLAGL1Q9UM63 463 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 EXO1Q9UQ84 846 aaKnown RBP11.21□□□□□ -0.61
FIRRE-201ENST00000427391 TMED5Q9Y3A6 229 aa11.21□□□□□ -0.61
FIRRE-201ENST00000427391 MYO9BQ13459 2157 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms