RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ZNF501Q96CX3 271 aaPredicted RBP7.12□□□□□ -1.27
LINC01049-201ENST00000426840 CABS1Q96KC9 395 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 ZIM3Q96PE6 472 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 OR4K3Q96R72 315 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 TAAR9Q96RI9 348 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 TMEM79Q9BSE2 394 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 DPH7Q9BTV6 452 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 ACAT2Q9BWD1 397 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 SPRY4Q9C004 299 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 B3GNT4Q9C0J1 378 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 CHRNA10Q9GZZ6 450 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 APMAPQ9HDC9 416 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 SLC6A20Q9NP91 592 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 ASCL3Q9NQ33 180 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 AKAP7Q9P0M2 348 aaPredicted RBP7.12□□□□□ -1.27
LINC01049-201ENST00000426840 TMEM216Q9P0N5 145 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 TAC3Q9UHF0 121 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 LGALS13Q9UHV8 139 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 RNF112Q9ULX5 631 aa7.12□□□□□ -1.27
LINC01049-201ENST00000426840 NCOR2Q9Y618 2525 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 OR2A25A4D2G3 310 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ANKRD33BA6NCL7 494 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 NCF1BA6NI72 391 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 NCF1CA8MVU1 366 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CDRT15L2A8MXV6 281 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 H3BMH7 237 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 UBXN8O00124 270 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 KLK8O60259 260 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CTSVO60911 334 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 KERAO60938 352 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TNFSF15O95150 251 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CTSBP07858 339 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 RBP1P09455 135 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 MSL3P1P0C860 447 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 JMJD7P0C870 316 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 EBLN1P0CF75 366 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 FGF5P12034 268 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 NCF1P14598 390 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 H2AFXP16104 143 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 KRT15P19012 456 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 MAGP20916 626 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CCND1P24385 295 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CMPK1P30085 196 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 GDF5P43026 501 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 HNMTP50135 292 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 MAPK10P53779 464 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TBPL1P62380 186 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 GABREP78334 506 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ABATP80404 500 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ACY1Q03154 408 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SLC18A2Q05940 514 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ZNF844Q08AG5 666 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 IFFO1Q0D2I5 559 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TSTA3Q13630 321 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 IL11RAQ14626 422 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SETDB1Q15047 1291 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TSNAXIP1Q2TAA8 658 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 FBXO48Q5FWF7 155 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TNFAIP8L3Q5GJ75 292 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PRAMEF13Q5VWM6 474 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SULT1C3Q6IMI6 304 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ZNF425Q6IV72 752 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CAPN13Q6MZZ7 669 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 KLC3Q6P597 504 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 LRIG3Q6UXM1 1119 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CDHR3Q6ZTQ4 885 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 FRA10AC1Q70Z53 315 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TRABD2AQ86V40 505 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 LCA5Q86VQ0 697 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 THOC6Q86W42 341 aaKnown RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PAQR7Q86WK9 346 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 FAM129CQ86XR2 697 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 LSMEM2Q8N112 164 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 C19orf47Q8N9M1 422 aaKnown RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PDPRQ8NCN5 879 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 USP7Q93009 1102 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ALKBH8Q96BT7 664 aaKnown RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TCTN2Q96GX1 697 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 OR6C1Q96RD1 312 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 EGFL8Q99944 293 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 MRPL57Q9BQC6 102 aaKnown RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PLCD4Q9BRC7 762 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PCBD2Q9H0N5 130 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PDE7BQ9NP56 450 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 MRPS30Q9NP92 439 aaKnown RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CCDC177Q9NQR7 707 aaPredicted RBP7.11□□□□□ -1.27
LINC01049-201ENST00000426840 FGF21Q9NSA1 209 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 ABCF3Q9NUQ8 709 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PCMTD2Q9NV79 361 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 TMEM184CQ9NVA4 438 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SLC39A1Q9NY26 324 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 CD274Q9NZQ7 290 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PISDQ9UG56 409 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 DCDC2Q9UHG0 476 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 PILRAQ9UKJ1 303 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 EMCNQ9ULC0 261 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SNX7Q9UNH6 387 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SH2B3Q9UQQ2 575 aa7.11□□□□□ -1.27
LINC01049-201ENST00000426840 SLC22A14Q9Y267 594 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms