RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 NPAS2Q99743 824 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 SMR3AQ99954 134 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 C10orf88Q9H8K7 445 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 MMP25Q9NPA2 562 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
HDAC6-206ENST00000426196 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 TXNDC9O14530 226 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 FOXS1O43638 330 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 OR1I1O60431 355 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 MAN1A2O60476 641 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 CDC40O60508 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC6-206ENST00000426196 GPC4O75487 556 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 SERPINC1P01008 464 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 FOXN2P32314 431 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 AVPR1BP47901 424 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 FAM53BQ14153 422 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 POU6F1Q14863 301 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 NR1I3Q14994 352 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 FBXO42Q6P3S6 717 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 CLEC9AQ6UXN8 241 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 RHOT2Q8IXI1 618 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 ZZZ3Q8IYH5 903 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 GOT1L1Q8NHS2 421 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-206ENST00000426196 SPATA3Q8NHX4 192 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 NUDT8Q8WV74 236 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 MBD6Q96DN6 1003 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 IQCDQ96DY2 449 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 GPATCH1Q9BRR8 931 aaKnown RBP13.36□□□□□ -0.27
HDAC6-206ENST00000426196 CAPN11Q9UMQ6 739 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 L3MBTL1Q9Y468 752 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 HYOU1Q9Y4L1 999 aa13.36□□□□□ -0.27
HDAC6-206ENST00000426196 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.36□□□□□ -0.278e-7■■■□□ 18.4
HDAC6-206ENST00000426196 OR51F1A6NGY5 319 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 SOWAHDA6NJG2 315 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 PSTPIP1O43586 416 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 INHBBP09529 407 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 TPH1P17752 444 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 BDKRB1P46663 353 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 PMPCAQ10713 525 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 NDUFA9Q16795 377 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 CCDC181Q5TID7 509 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 TMEM198Q66K66 360 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 ARHGAP11AQ6P4F7 1023 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
HDAC6-206ENST00000426196 ANKRD37Q7Z713 158 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 ACRBPQ8NEB7 543 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 OR5M3Q8NGP4 307 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 SKA2Q8WVK7 121 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-206ENST00000426196 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 ACAT2Q9BWD1 397 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 SLC6A16Q9GZN6 736 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 MRPS30Q9NP92 439 aaKnown RBP13.35□□□□□ -0.27
HDAC6-206ENST00000426196 UTP6Q9NYH9 597 aaKnown RBP13.35□□□□□ -0.27
HDAC6-206ENST00000426196 TTC7AQ9ULT0 858 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-206ENST00000426196 HRH3Q9Y5N1 445 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 HIVEP2P31629 2446 aa13.35□□□□□ -0.27
HDAC6-206ENST00000426196 A0A0U1RQJ8 604 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 A0A1W2PPV9 198 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 FAM171A2A8MVW0 826 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 KIAA1324LA8MWY0 1029 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-206ENST00000426196 APOC4-APOC2K7ER74 178 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 NDC80O14777 642 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 C1orf105O95561 183 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 APOC2P02655 101 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 PKMP14618 531 aaKnown RBP13.34□□□□□ -0.27
HDAC6-206ENST00000426196 TFEBP19484 476 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 COMTP21964 271 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 CCNFP41002 786 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 CYB561P49447 251 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 NUP107P57740 925 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 ACTN3Q08043 901 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-206ENST00000426196 PTK6Q13882 451 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 CDKL3Q8IVW4 592 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-206ENST00000426196 RPRMLQ8N4K4 120 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 LRRN4CLQ8ND94 238 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 WFDC11Q8NEX6 87 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 LKAAEAR1Q8TD35 194 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 MAGEC3Q8TD91 643 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 PWWP2AQ96N64 755 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 SPATA13Q96N96 652 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 FOPNLQ96NB1 174 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 LPAR4Q99677 370 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 BPIFA3Q9BQP9 254 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 CARD6Q9BX69 1037 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 CDCP1Q9H5V8 836 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 RASSF1Q9NS23 344 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 SPATA7Q9P0W8 599 aa13.34□□□□□ -0.27
HDAC6-206ENST00000426196 KLF13Q9Y2Y9 288 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-206ENST00000426196 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
HDAC6-206ENST00000426196 CCDC162PA2VCL2 907 aa13.33□□□□□ -0.28
HDAC6-206ENST00000426196 H0YIG0 161 aa13.33□□□□□ -0.28
HDAC6-206ENST00000426196 HS6ST1O60243 411 aa13.33□□□□□ -0.28
HDAC6-206ENST00000426196 HEXAP06865 529 aa13.33□□□□□ -0.28
HDAC6-206ENST00000426196 EZRP15311 586 aaKnown RBP13.33□□□□□ -0.28
HDAC6-206ENST00000426196 AOAHP28039 575 aa13.33□□□□□ -0.28
HDAC6-206ENST00000426196 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-206ENST00000426196 YBX1P67809 324 aaKnown RBP13.33□□□□□ -0.28
HDAC6-206ENST00000426196 CMPK2Q5EBM0 449 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms