RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 LCTLQ6UWM7 567 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 CYS1Q717R9 158 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 VN1R4Q7Z5H5 301 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 C17orf64Q86WR6 236 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 PTRH1Q86Y79 214 aaKnown RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 SHISA5Q8N114 240 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 OR56A3Q8NH54 315 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 ABHD17AQ96GS6 310 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 TSNARE1Q96NA8 513 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 MESP1Q9BRJ9 268 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 KRTAP3-3Q9BYR6 98 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 KRTAP3-2Q9BYR7 98 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 SPNS1Q9H2V7 528 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 CDC42EP4Q9H3Q1 356 aaKnown RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 SOX17Q9H6I2 414 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 POPDC3Q9HBV1 291 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 CTNNAL1Q9UBT7 734 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 PADI2Q9Y2J8 665 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 PYCARD-AS1I3L0S3 204 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 RFPL1O75677 317 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 RECKO95980 971 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 TUBB4AP04350 444 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 CCDC166P0CW27 439 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 STMN1P16949 149 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 BCL6P41182 706 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 DLG1Q12959 904 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 OR4D1Q15615 310 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 NKG7Q16617 165 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 FAM214AQ32MH5 1076 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 CATSPEREQ5SY80 951 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 GRTP1Q5TC63 336 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 FRA10AC1Q70Z53 315 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 PRSS41Q7RTY9 318 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 MRGPREQ86SM8 312 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 PRSS58Q8IYP2 241 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 ARHGEF39Q8N4T4 335 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 OR2Y1Q8NGV0 311 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 C9orf43Q8TAL5 461 aaPredicted RBP12.98□□□□□ -0.33
SNX3-204ENST00000426155 THAP4Q8WY91 577 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 RERGQ96A58 199 aaPredicted RBP12.98□□□□□ -0.33
SNX3-204ENST00000426155 PTERQ96BW5 349 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 TSPAN17Q96FV3 270 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 SPSB2Q99619 263 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 EGFL8Q99944 293 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 DHRS4Q9BTZ2 278 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 TRIM54Q9BYV2 358 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 SLC25A18Q9H1K4 315 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 ADNPQ9H2P0 1102 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 TMEM184CQ9NVA4 438 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 TLK1Q9UKI8 766 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 NOVA2Q9UNW9 492 aaKnown RBP12.98□□□□□ -0.33
SNX3-204ENST00000426155 TP53TG5Q9Y2B4 290 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 OARD1Q9Y530 152 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 SCN2AQ99250 2005 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 SPTA1P02549 2419 aa12.98□□□□□ -0.33
SNX3-204ENST00000426155 A0A0A6YYC8 382 aaPredicted RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 I3L1I5 382 aaPredicted RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 FOXS1O43638 330 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 LCMT2O60294 686 aaKnown RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 ALOX12BO75342 701 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 ACSL3O95573 720 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 PDGFAP04085 211 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 CD1DP15813 335 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 CCND1P24385 295 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 SPRP35270 261 aaPredicted RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 GDF5P43026 501 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 RAB10P61026 200 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 IRF9Q00978 393 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 CSHL1Q14406 222 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 UAP1Q16222 522 aaPredicted RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 SYT16Q17RD7 645 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 MUM1Q2TAK8 710 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 YOD1Q5VVQ6 348 aaPredicted RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 OVCH1Q7RTY7 1134 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 PPP1R32Q7Z5V6 425 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 ADAMTSL2Q86TH1 951 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 ZCCHC10Q8TBK6 192 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 EXT2Q93063 718 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 NEIL2Q969S2 332 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 COL26A1Q96A83 441 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 FKBP10Q96AY3 582 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 FMO2Q99518 471 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 C17orf62Q9BQA9 187 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 TMEM79Q9BSE2 394 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 DERL2Q9GZP9 239 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 PCBD2Q9H0N5 130 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 ING2Q9H160 280 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
SNX3-204ENST00000426155 MTRF1LQ9UGC7 380 aaKnown RBP12.97□□□□□ -0.33
SNX3-204ENST00000426155 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 HMX2A2RU54 273 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 B8ZZF3 427 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 ONECUT2O95948 504 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 ANXA5P08758 320 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 SLC35E2BP0CK96 405 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 FBLP22087 321 aaKnown RBP12.96□□□□□ -0.33
SNX3-204ENST00000426155 CCL11P51671 97 aa12.96□□□□□ -0.33
SNX3-204ENST00000426155 RPS15AP62244 130 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms