RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 SPPL2CQ8IUH8 684 aa15.28■□□□□ 0.04
PUDP-203ENST00000424830 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
PUDP-203ENST00000424830 SMPDL3AQ92484 453 aa15.28■□□□□ 0.04
PUDP-203ENST00000424830 ZNF354BQ96LW1 612 aa15.28■□□□□ 0.04
PUDP-203ENST00000424830 SPOCK3Q9BQ16 436 aa15.28■□□□□ 0.04
PUDP-203ENST00000424830 C19orf25Q9UFG5 118 aaPredicted RBP15.28■□□□□ 0.04
PUDP-203ENST00000424830 ZNF835Q9Y2P0 537 aa15.28■□□□□ 0.04
PUDP-203ENST00000424830 MEMO1Q9Y316 297 aa15.28■□□□□ 0.04
PUDP-203ENST00000424830 NDUFS3O75489 264 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 SUN1O94901 812 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 CCNDBP1O95273 360 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 EEF1DP29692 281 aaKnown RBP15.27■□□□□ 0.04
PUDP-203ENST00000424830 FDFT1P37268 417 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 AVPR1BP47901 424 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 KRTAP10-9P60411 292 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 TLE4Q04727 773 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 TSTA3Q13630 321 aaPredicted RBP15.27■□□□□ 0.04
PUDP-203ENST00000424830 SYT16Q17RD7 645 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 BTBD16Q32M84 506 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 KRTAP21-3Q3LHN1 58 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 ANKRD20A4Q4UJ75 823 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 ACER2Q5QJU3 275 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 MFSD4BQ5TF39 518 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 Q6ZPB1 254 aaPredicted RBP15.27■□□□□ 0.04
PUDP-203ENST00000424830 PAQR7Q86WK9 346 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 BEST3Q8N1M1 668 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 MPP5Q8N3R9 675 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 UBL4BQ8N7F7 174 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 SLC35B2Q8TB61 432 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 ADAMTS18Q8TE60 1221 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 UTP23Q9BRU9 249 aaKnown RBP15.27■□□□□ 0.04
PUDP-203ENST00000424830 P2RY12Q9H244 342 aa15.27■□□□□ 0.04
PUDP-203ENST00000424830 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
PUDP-203ENST00000424830 FOXS1O43638 330 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 SEC24DO94855 1032 aaPredicted RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 CYC1P08574 325 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 EZRP15311 586 aaKnown RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 CD46P15529 392 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 ABOP16442 354 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 RPS3P23396 243 aaKnown RBP eCLIP15.26■□□□□ 0.03
PUDP-203ENST00000424830 GRIA1P42261 906 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 KIR3DL1P43629 444 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 EIF3BP55884 814 aaKnown RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 MAT1AQ00266 395 aaKnown RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 TUBA3CQ13748 450 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 FAM53BQ14153 422 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 CDSNQ15517 529 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 NDUFA9Q16795 377 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 MINDY4Q4G0A6 757 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 PLAG1Q6DJT9 500 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 TUBA3EQ6PEY2 450 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 SUSD1Q6UWL2 747 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 TMEM178AQ8NBL3 297 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 FAM98AQ8NCA5 519 aaKnown RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 MNS1Q8NEH6 495 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 OR9A1PQ8NGU1 263 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 OR2A5Q96R48 311 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 LACRTQ9GZZ8 138 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 TSPAN10Q9H1Z9 355 aaPredicted RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 ETNK1Q9HBU6 452 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 MCCC2Q9HCC0 563 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 KLHL1Q9NR64 748 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 MARCH4Q9P2E8 410 aaPredicted RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 TSR3Q9UJK0 312 aaKnown RBP15.26■□□□□ 0.03
PUDP-203ENST00000424830 GUCA1BQ9UMX6 200 aa15.26■□□□□ 0.03
PUDP-203ENST00000424830 EFCAB8A8MWE9 144 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 NPIPA5E9PKD4 350 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 MATN4O95460 622 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 ERGP11308 486 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 ATP5DP30049 168 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 STIP1P31948 543 aaKnown RBP15.25■□□□□ 0.03
PUDP-203ENST00000424830 ARHGAP19Q14CB8 494 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 OR1C1Q15619 314 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 MEP1AQ16819 746 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 ICE2Q659A1 982 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 FCRLBQ6BAA4 426 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 CPEB2Q7Z5Q1 589 aaKnown RBP15.25■□□□□ 0.03
PUDP-203ENST00000424830 ADCK2Q7Z695 626 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 EID3Q8N140 333 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 RNF10Q8N5U6 811 aaKnown RBP15.25■□□□□ 0.03
PUDP-203ENST00000424830 OTUD6BQ8N6M0 293 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 HORMAD2Q8N7B1 307 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 MDS2Q8NDY4 140 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 VN1R1Q9GZP7 353 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 SYNPO2LQ9H987 977 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 KCNK13Q9HB14 408 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 CHRAC1Q9NRG0 131 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 ANKRD10Q9NXR5 420 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 TAC3Q9UHF0 121 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 PCYOX1Q9UHG3 505 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 AMFRQ9UKV5 643 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 NPIPA1Q9UND3 350 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 DUSP10Q9Y6W6 482 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 NIPBLQ6KC79 2804 aaeCLIP15.25■□□□□ 0.03
PUDP-203ENST00000424830 GTF3C1Q12789 2109 aa15.25■□□□□ 0.03
PUDP-203ENST00000424830 IGHV3-20A0A0C4DH32 117 aa15.24■□□□□ 0.03
PUDP-203ENST00000424830 IGKV1-8A0A0C4DH67 115 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms