RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 EZRP15311 586 aaKnown RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 FBLP22087 321 aaKnown RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 CARSP49589 748 aaKnown RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 PGGT1BP53609 377 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 SOX8P57073 446 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 TBPL1P62380 186 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 SNRPNP63162 240 aaKnown RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 KLC1Q07866 573 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 AIMP2Q13155 320 aaKnown RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 PLEKHN1Q494U1 663 aaPredicted RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 VWA2Q5GFL6 755 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 THEMIS2Q5TEJ8 643 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 PRAMEF13Q5VWM6 474 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 PRMT9Q6P2P2 845 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 TRMT10BQ6PF06 316 aaKnown RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 CCDC25Q86WR0 208 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 CNTN4Q8IWV2 1026 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 FAM26EQ8N5C1 309 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 GALNT11Q8NCW6 608 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 OR11G2Q8NGC1 345 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 EEF1AKMT1Q8WVE0 214 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 NACC2Q96BF6 587 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 CERS2Q96G23 380 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 SEMA3GQ9NS98 782 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 ZNF282Q9UDV7 671 aaPredicted RBP14.46□□□□□ -0.09
USB1-202ENST00000423271 VPS4AQ9UN37 437 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 SH2B3Q9UQQ2 575 aa14.46□□□□□ -0.09
USB1-202ENST00000423271 EIF3FO00303 357 aaPredicted RBP14.45□□□□□ -0.1
USB1-202ENST00000423271 AHSGP02765 367 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 ZGLP1P0C6A0 271 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 ABATP80404 500 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 TUBB8Q3ZCM7 444 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 PAQR3Q6TCH7 311 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 IGFL3Q6UXB1 125 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 CAPN12Q6ZSI9 719 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 PARP9Q8IXQ6 854 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 ARHGEF39Q8N4T4 335 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 IFT81Q8WYA0 676 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 MIEF2Q96C03 454 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 C8orf44Q96CB5 159 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 C19orf60Q96EN9 201 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 PHACTR1Q9C0D0 580 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 CCDC177Q9NQR7 707 aaPredicted RBP14.45□□□□□ -0.1
USB1-202ENST00000423271 MAP10Q9P2G4 905 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 PDE10AQ9Y233 779 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 MRPS2Q9Y399 296 aaKnown RBP14.45□□□□□ -0.1
USB1-202ENST00000423271 CSAG2Q9Y5P2 127 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 HIVEP3Q5T1R4 2406 aa14.45□□□□□ -0.1
USB1-202ENST00000423271 IGLV3-12A0A075B6K2 115 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 H7BY64 318 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 FOXS1O43638 330 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 RHOXF2BP0C7M4 288 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 EMP3P54852 163 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 OCA2Q04671 838 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 Q0VFX4 171 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 DSG2Q14126 1118 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 PHKG1Q16816 387 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 SYT16Q17RD7 645 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 LAPTM4BQ86VI4 370 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 AMER3Q8N944 861 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 PYROXD1Q8WU10 500 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 RERGQ96A58 199 aaPredicted RBP14.44□□□□□ -0.1
USB1-202ENST00000423271 LINGO1Q96FE5 620 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 PRAP1Q96NZ9 151 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 RHOXF2Q9BQY4 288 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 PPANQ9NQ55 473 aaKnown RBP14.44□□□□□ -0.1
USB1-202ENST00000423271 TAS2R13Q9NYV9 303 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 TRPC4Q9UBN4 977 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 C3orf18Q9UK00 162 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 B3GNT3Q9Y2A9 372 aa14.44□□□□□ -0.1
USB1-202ENST00000423271 A0A0A6YYC8 382 aaPredicted RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 TCP11X1B4DZS4 312 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 I3L1I5 382 aaPredicted RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 IPO13O94829 963 aaKnown RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 TSPAN12O95859 305 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 C8GP07360 202 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 ACPPP15309 386 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 ECHS1P30084 290 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 SSTR1P30872 391 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 MAGEA4P43358 317 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 RGS4P49798 205 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 MRPL49Q13405 166 aaKnown RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 FRG1Q14331 258 aaKnown RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 TEDDM1Q5T9Z0 273 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 GARNL3Q5VVW2 1013 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 LRRC8EQ6NSJ5 796 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 UGT3A1Q6NUS8 523 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 KIAA0408Q6ZU52 694 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 VN1R4Q7Z5H5 301 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 CUZD1Q86UP6 607 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 SHISA5Q8N114 240 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 MYO1HQ8N1T3 1032 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 MCOLN3Q8TDD5 553 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 SNRNP40Q96DI7 357 aaKnown RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 MVB12AQ96EY5 273 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 MMABQ96EY8 250 aaPredicted RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 YIPF2Q9BWQ6 316 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 ILKAPQ9H0C8 392 aaPredicted RBP14.43□□□□□ -0.1
USB1-202ENST00000423271 ATG10Q9H0Y0 220 aa14.43□□□□□ -0.1
USB1-202ENST00000423271 ZNF160Q9HCG1 818 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms