RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 SARGQ9BW04 601 aa16.28■□□□□ 0.2
COL7A1-202ENST00000422991 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
COL7A1-202ENST00000422991 SYNPO2LQ9H987 977 aa16.28■□□□□ 0.2
COL7A1-202ENST00000422991 SEMA4BQ9NPR2 832 aaPredicted RBP16.28■□□□□ 0.2
COL7A1-202ENST00000422991 FGF21Q9NSA1 209 aa16.28■□□□□ 0.2
COL7A1-202ENST00000422991 GEMIN8Q9NWZ8 242 aaKnown RBP16.28■□□□□ 0.2
COL7A1-202ENST00000422991 NKIRAS1Q9NYS0 192 aa16.28■□□□□ 0.2
COL7A1-202ENST00000422991 PLCL2Q9UPR0 1127 aa16.28■□□□□ 0.2
COL7A1-202ENST00000422991 ASPMQ8IZT6 3477 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 TRBC2A0A5B9 178 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 TMEM150CB9EJG8 249 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 BIRC5O15392 142 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 WFS1O76024 890 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 JMJD7P0C870 316 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 GRK3P35626 688 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 BCL6P41182 706 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 CDH13P55290 713 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 WDR4P57081 412 aaKnown RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 NAA20P61599 178 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 RPS15AP62244 130 aaKnown RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 CLCQ05315 142 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 FOXM1Q08050 763 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 CYP4F3Q08477 520 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 ZC3H12BQ5HYM0 836 aaKnown RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 FRMPD2BQ6IN97 320 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 MCATQ8IVS2 390 aaKnown RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 OR52B6Q8NGF0 335 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 GATA6Q92908 595 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 ZNF501Q96CX3 271 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 PRR11Q96HE9 360 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 ZNF285Q96NJ3 590 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 OR2A5Q96R48 311 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 ZNF382Q96SR6 550 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 GATA5Q9BWX5 397 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-202ENST00000422991 POLR1BQ9H9Y6 1135 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 FANCEQ9HB96 536 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 MLXIPLQ9NP71 852 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 MED4Q9NPJ6 270 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 FBXO8Q9NRD0 319 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 PISDQ9UG56 409 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 PCDHGA8Q9Y5G5 932 aa16.27■□□□□ 0.2
COL7A1-202ENST00000422991 A0A0J9YVX5 310 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 FEZF1A0PJY2 475 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 H3BMH7 237 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 UGDHO60701 494 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 OTCP00480 354 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 TSPAN8P19075 237 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 CXCR2P25025 360 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 CCNG1P51959 295 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 RAB15P59190 212 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 GABREP78334 506 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 LCP2Q13094 533 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 IL11RAQ14626 422 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 RBBP7Q16576 425 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 CFAP157Q5JU67 520 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 HHATQ5VTY9 493 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 GRHL2Q6ISB3 625 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 CYB5D1Q6P9G0 228 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 FOXR1Q6PIV2 292 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 L3MBTL4Q8NA19 623 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 OR8K5Q8NH50 307 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 OR1L3Q8NH93 324 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 MGARPQ8TDB4 240 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 TRPC4APQ8TEL6 797 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 SREK1Q8WXA9 508 aaKnown RBP16.26■□□□□ 0.19
COL7A1-202ENST00000422991 PMEPA1Q969W9 287 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 THAP11Q96EK4 314 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 NTMT1Q9BV86 223 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 PITHD1Q9GZP4 211 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-202ENST00000422991 ACTR8Q9H981 624 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 APMAPQ9HDC9 416 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 SLC39A1Q9NY26 324 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 RARRES3Q9UL19 164 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 PCDHGA4Q9Y5G9 962 aa16.26■□□□□ 0.19
COL7A1-202ENST00000422991 KCNE1BA0A087WTH5 132 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 LOC105369274A0A096LPK9 316 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 LOC102723532A0A0G2JNH3 316 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 A0A1B0GTL3 188 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 TMEM8BA6NDV4 472 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 C1QTNF9BB2RNN3 333 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 H0YGG7 62 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 PPP6CO00743 305 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 LCMT2O60294 686 aaKnown RBP16.25■□□□□ 0.19
COL7A1-202ENST00000422991 H2AFYO75367 372 aaKnown RBP16.25■□□□□ 0.19
COL7A1-202ENST00000422991 MLYCDO95822 493 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 CTSBP07858 339 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 C1QTNF9P0C862 333 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 FGF5P12034 268 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 CCR10P46092 362 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 SCTRP47872 440 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 MAPK10P53779 464 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 ARF3P61204 181 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-202ENST00000422991 PPP2R2AP63151 447 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 LAPTM5Q13571 262 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 ST3GAL2Q16842 350 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 HSP90B2PQ58FF3 399 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 PAGE2BQ5JRK9 111 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 LIPJQ5W064 366 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 TMIGD1Q6UXZ0 262 aa16.25■□□□□ 0.19
COL7A1-202ENST00000422991 ZCCHC23Q6ZST2 131 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms