RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ZCCHC3Q9NUD5 404 aaKnown RBP10.42□□□□□ -0.74
PTCH1-206ENST00000421141 TBX21Q9UL17 535 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 FAM159BA6NKW6 160 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 ECDO95905 644 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-206ENST00000421141 OTX2P32243 289 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 GRIA1P42261 906 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 RPS13P62277 151 aaKnown RBP10.42□□□□□ -0.74
PTCH1-206ENST00000421141 SLC34A1Q06495 639 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 NRF1Q16656 503 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 PTCHD3Q3KNS1 767 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 GPR65Q8IYL9 337 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 FBXW8Q8N3Y1 598 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 GFRA2O00451 464 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 PROS1P07225 676 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 EBLN1P0CF75 366 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 NR2C1P13056 603 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 TRIM71Q2Q1W2 868 aaKnown RBP10.42□□□□□ -0.74
PTCH1-206ENST00000421141 PRR11Q96HE9 360 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-206ENST00000421141 HDHD2Q9H0R4 259 aa10.42□□□□□ -0.74
PTCH1-206ENST00000421141 WDR55Q9H6Y2 383 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-206ENST00000421141 CENPXA8MT69 81 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 FHP07954 510 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 MPC1LP0DKB6 136 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 HMGCLP35914 325 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 CCR10P46092 362 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 MRPS35P82673 323 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ARMCX4Q5H9R4 360 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SPESP1Q6UW49 350 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SCML4Q8N228 414 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 EPYCQ99645 322 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 PLEKHA1Q9HB21 404 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 WDR81Q562E7 1941 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 E7EQ34 232 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 PCDHGA12O60330 932 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ST13P50502 369 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 EGFLAMQ63HQ2 1017 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 LHX8Q68G74 356 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 TNFAIP8L2Q6P589 184 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF572Q7Z3I7 529 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 RBM12BQ8IXT5 1001 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 OR5L2Q8NGL0 311 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 GPATCH1Q9BRR8 931 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 OXSMQ9NWU1 459 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SCN3AQ9NY46 2000 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 STX16-NPEPL1H3BU86 382 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 STX16O14662 325 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 LDOC1O95751 146 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 JUNP05412 331 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 GRM7Q14831 915 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 CPNE8Q86YQ8 564 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF347Q96SE7 839 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ACOT7O00154 380 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 CYB5AP00167 134 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 OLIG2Q13516 323 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 TTC23Q5W5X9 447 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 UNC5DQ6UXZ4 953 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 RASGEF1AQ8N9B8 481 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 FAM81AQ8TBF8 368 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 NEK7Q8TDX7 302 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 MARCH5Q9NX47 278 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 KCTD3Q9Y597 815 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ARHGEF33A8MVX0 844 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SYNGR4O95473 234 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 COX10Q12887 443 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SLC30A6Q6NXT4 461 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SCD5Q86SK9 330 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 RFKQ969G6 155 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 G6PC3Q9BUM1 346 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 RNF38Q9H0F5 515 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF334Q9HCZ1 680 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 EPHA6Q9UF33 1036 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 KIR2DS5A0A0G2JLQ3 304 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 A0A0G2JNG1 304 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 KIR2DS3K7RE56 304 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 TRIM3O75382 744 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 TNFAIP8O95379 198 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 RNH1P13489 461 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 BPIP17213 487 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 NUP62P37198 522 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 SOX9P48436 509 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 KIR2DS5Q14953 304 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 MANEALQ5VSG8 457 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 CLEC1AQ8NC01 280 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 ESAMQ96AP7 390 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 MOAP1Q96BY2 351 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 PTCHD1Q96NR3 888 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 CAMK1GQ96NX5 476 aa10.41□□□□□ -0.74
PTCH1-206ENST00000421141 MKKSQ9NPJ1 570 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-206ENST00000421141 WASHC1A8K0Z3 465 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 WASH3PC4AMC7 463 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 CLPTM1O96005 669 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 OR4D2P58180 307 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 PITX1P78337 314 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-206ENST00000421141 PTPRCAPQ14761 206 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF311Q5JNZ3 666 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 REP15Q6BDI9 236 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 WASH2PQ6VEQ5 465 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 MOCS1Q9NZB8 636 aa10.4□□□□□ -0.74
PTCH1-206ENST00000421141 GRHL1Q9NZI5 618 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms