RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CYC1P08574 325 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 SNRPB2P08579 225 aaKnown RBP15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 AGAP20933 346 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZNF75DP51815 510 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 ABATP80404 500 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 NDUFA9Q16795 377 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 KLHL38Q2WGJ6 581 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 ACSBG2Q5FVE4 666 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 ZNF766Q5HY98 468 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 PLAG1Q6DJT9 500 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 C4orf22Q6V702 233 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 NEK10Q6ZWH5 1172 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 AMER2Q8N7J2 671 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 FAM136AQ96C01 138 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 MFSD3Q96ES6 412 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 CYTH2Q99418 400 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 KIFC1Q9BW19 673 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 GALPQ9UBC7 116 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 CAPN6Q9Y6Q1 641 aa15.96■□□□□ 0.15
UPF3AP3-201ENST00000420996 PCNX1Q96RV3 2341 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 A8MUI8 341 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 E7ENX8 843 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 P2RX6O15547 441 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 WISP2O76076 250 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 SEC24DO94855 1032 aaPredicted RBP15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 SLC16A8O95907 504 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 AVPR1BP47901 424 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 ADORA2A-AS1P86434 159 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 MAT1AQ00266 395 aaKnown RBP15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 PMP22Q01453 160 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 TAP2Q03519 686 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 H3F3CQ6NXT2 135 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 CPEB2Q7Z5Q1 589 aaKnown RBP15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 FBXO15Q8NCQ5 510 aaPredicted RBP15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 ZNF354BQ96LW1 612 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 EBNA1BP2Q99848 306 aaKnown RBP15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 BAG1Q99933 345 aaPredicted RBP15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 TRIM8Q9BZR9 551 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 VN1R1Q9GZP7 353 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 CRYL1Q9Y2S2 319 aa15.95■□□□□ 0.14
UPF3AP3-201ENST00000420996 GOLGA8KD6RF30 607 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 H0YIG0 161 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 GOLGA8TH3BQL2 631 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 HAT1O14929 419 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 ESRRAP11474 423 aaPredicted RBP15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 MGAT1P26572 445 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 SMSP52788 366 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 BASP1P80723 227 aaKnown RBP15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 CCNG2Q16589 344 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 BTBD16Q32M84 506 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 ACER2Q5QJU3 275 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 CES3Q6UWW8 571 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 ADCK2Q7Z695 626 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 RNF10Q8N5U6 811 aaKnown RBP15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 PPFIBP2Q8ND30 876 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 OR9A4Q8NGU2 314 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 THAP3Q8WTV1 239 aaPredicted RBP15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 ZNF480Q8WV37 535 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 SYBUQ9NX95 663 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 C19orf25Q9UFG5 118 aaPredicted RBP15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 SOX13Q9UN79 622 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 ZNF835Q9Y2P0 537 aa15.94■□□□□ 0.14
UPF3AP3-201ENST00000420996 IGHV3-20A0A0C4DH32 117 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 E5RI56 91 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 SMAPO00193 183 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 TTI1O43156 1089 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 NSA2O95478 260 aaKnown RBP15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 MLYCDO95822 493 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 OGNP20774 298 aaKnown RBP15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 KCNJ11Q14654 390 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 C3AR1Q16581 482 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 KRTCAP3Q53RY4 240 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 DRICH1Q6PGQ1 229 aaPredicted RBP15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 Q6ZPB1 254 aaPredicted RBP15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 LANCL3Q6ZV70 420 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 PLD3Q8IV08 490 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 TMEM139Q8IV31 216 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 REXO1L1PQ8IX06 675 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 ZNF295-AS1Q8N0V1 137 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 BEST3Q8N1M1 668 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 ADAMTS18Q8TE60 1221 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 DESI2Q9BSY9 194 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 TINAGQ9UJW2 476 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 VPS9D1Q9Y2B5 631 aa15.93■□□□□ 0.14
UPF3AP3-201ENST00000420996 SCN3AQ9NY46 2000 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 H7BY64 318 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 AGTR2P50052 363 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 CLCN7P51798 805 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 SNRPNP63162 240 aaKnown RBP15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 CDK16Q00536 496 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 TUBA3CQ13748 450 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 PTK6Q13882 451 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 SIX1Q15475 284 aaPredicted RBP15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 TTLL9Q3SXZ7 439 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 MINDY4Q4G0A6 757 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 THEMIS2Q5TEJ8 643 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 MFSD4BQ5TF39 518 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 FCRLBQ6BAA4 426 aa15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 KIAA0930Q6ICG6 404 aaPredicted RBP15.92■□□□□ 0.14
UPF3AP3-201ENST00000420996 TUBA3EQ6PEY2 450 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms