RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CLYBLQ8N0X4 340 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 KRT78Q8N1N4 520 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 SIMC1Q8NDZ2 872 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF398Q8TD17 642 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 WFIKKN2Q8TEU8 576 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 NELFBQ8WX92 580 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 OVCA2Q8WZ82 227 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ART4Q93070 314 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 FBXO32Q969P5 355 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 RMND5BQ96G75 393 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 BARD1Q99728 777 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 TUBB6Q9BUF5 446 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 TMEM109Q9BVC6 243 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 OR2B2Q9GZK3 357 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 KLC2Q9H0B6 622 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 TMEM168Q9H0V1 697 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 C17orf75Q9HAS0 396 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 SAR1AQ9NR31 198 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 AGPAT4Q9NRZ5 378 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ING3Q9NXR8 418 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 MRPL39Q9NYK5 338 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 TRPS1Q9UHF7 1281 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 AP3M1Q9Y2T2 418 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 PCDHA3Q9Y5H8 950 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 SNX5Q9Y5X3 404 aa5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 COPG1Q9Y678 874 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-206ENST00000417628 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 DCHS2Q6V1P9 2916 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 A0A1W2PQ67 120 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 EFCAB10A6NFE3 127 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CAPN14A8MX76 684 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 INAFM1C9JVW0 142 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 E7EWF7 191 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 C19orf84I3L1E1 186 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CES2O00748 559 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 DAPK3O43293 454 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 ZBTB14O43829 449 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 ACSL4O60488 711 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 TOM1L1O75674 476 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SULT1C4O75897 302 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 BAG2O95816 211 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 LY6G6DO95868 133 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 IFNA14P01570 189 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 PCNAP12004 261 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CPA1P15085 419 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 YWHAQP27348 245 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 AKT2P31751 481 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 HPDP32754 393 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 RBMXP38159 391 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 GP5P40197 560 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 PBX1P40424 430 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 VPS41P49754 854 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CDK9P50750 372 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 RCAN1P53805 252 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SESN2P58004 480 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 VBP1P61758 197 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 RAB1AP62820 205 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 BAMBIQ13145 260 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 STX3Q13277 289 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 APOFQ13790 326 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 FZD2Q14332 565 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 LSM12Q3MHD2 195 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 KHDC1Q4VXA5 237 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 PDLIM3Q53GG5 364 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 DCAF10Q5QP82 559 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 DCAF12Q5T6F0 453 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 FAM91A1Q658Y4 838 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 ERAP2Q6P179 960 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 APOA5Q6Q788 366 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 GCNT7Q6ZNI0 430 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 GSTA5Q7RTV2 222 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 PEX26Q7Z412 305 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 PTAR1Q7Z6K3 402 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CCDC25Q86WR0 208 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 STX12Q86Y82 276 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 RBMXL3Q8N7X1 1067 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 FBXO15Q8NCQ5 510 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF680Q8NEM1 530 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 OR6C4Q8NGE1 309 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 OR6S1Q8NH40 331 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CEP70Q8NHQ1 597 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 ADAMTS16Q8TE57 1224 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF480Q8WV37 535 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SIGLEC10Q96LC7 697 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SERPINB12Q96P63 405 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 TEFMQ96QE5 360 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 VPS35Q96QK1 796 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SNX18Q96RF0 628 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 TBCBQ99426 244 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 VRK1Q99986 396 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SPATA25Q9BR10 227 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 C9orf16Q9BUW7 83 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC2A11Q9BYW1 496 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 TWSG1Q9GZX9 223 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 MANSC1Q9H8J5 431 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 BCO1Q9HAY6 547 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SPASTQ9UBP0 616 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 NKX1-2Q9UD57 310 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms