RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RIBC1Q8N443 379 aaPredicted RBP22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 ZSCAN1Q8NBB4 408 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 EPS8L3Q8TE67 593 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 FAM117AQ9C073 453 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 ZNF358Q9NW07 568 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 KCND3Q9UK17 655 aa22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 TNPO3Q9Y5L0 923 aaKnown RBP22.08■■□□□ 1.13
SMARCB1-205ENST00000417137 ZFYVE26Q68DK2 2539 aa22.08■■□□□ 1.12
SMARCB1-205ENST00000417137 PCM1Q15154 2024 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 CLGNO14967 610 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 ERLIN1O75477 346 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 CTSBP07858 339 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 MTHFD2P13995 350 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 TCN2P20062 427 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 ALAS2P22557 587 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 CXCR2P25025 360 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 RORAP35398 523 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 EMP3P54852 163 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 ALDH18A1P54886 795 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 PFKFB4Q16877 469 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 CATSPEREQ5SY80 951 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 LRRC70Q7Z2Q7 622 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 VASH2Q86V25 355 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 PLD3Q8IV08 490 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 CSNK1A1LQ8N752 337 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 SNX31Q8N9S9 440 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 MZB1Q8WU39 189 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 UBTD2Q8WUN7 234 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 C17orf62Q9BQA9 187 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 AIF1LQ9BQI0 150 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 MRPL46Q9H2W6 279 aaKnown RBP22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 STARD5Q9NSY2 213 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 CUTCQ9NTM9 273 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 OPTCQ9UBM4 332 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 DCDC2Q9UHG0 476 aa22.07■■□□□ 1.12
SMARCB1-205ENST00000417137 PKD1L2Q7Z442 2459 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 LOC101059948A0A1B0GTJ6 334 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 TRBC2A0A5B9 178 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 HYKKA2RU49 373 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 C21orf140B9A014 251 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 KLK8O60259 260 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 SMIM24O75264 130 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 GSTA1P08263 222 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 C1GALT1C1LP0DN25 315 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 PYGBP11216 843 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 DLSTP36957 453 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 DCDP81605 110 aaKnown RBP22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 PDK4Q16654 411 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 METTL2BQ6P1Q9 378 aaKnown RBP22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 TTLL10Q6ZVT0 673 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 TMPRSS11BQ86T26 416 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 OR2W6PQ8NHA6 318 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 ESAMQ96AP7 390 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 SARGQ9BW04 601 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 GPR87Q9BY21 358 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 CPSF2Q9P2I0 782 aaKnown RBP22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 CROTQ9UKG9 612 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 SDK2Q58EX2 2172 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 WDFY3Q8IZQ1 3526 aa22.06■■□□□ 1.12
SMARCB1-205ENST00000417137 FEZF1A0PJY2 475 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 GOLGA8RI6L899 631 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 K7EPI3 171 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 OR1F1O43749 312 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 PIM1P11309 404 aaPredicted RBP22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 LIFP15018 202 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 RPS15P62841 145 aaKnown RBP22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 SETDB1Q15047 1291 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 MUM1Q2TAK8 710 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 PRTGQ2VWP7 1150 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 FBXO48Q5FWF7 155 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 GARNL3Q5VVW2 1013 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 ZNF517Q6ZMY9 492 aaPredicted RBP22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 MFSD9Q8NBP5 474 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 CAMKVQ8NCB2 501 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 EHD1Q9H4M9 534 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 XPR1Q9UBH6 696 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 DHCR7Q9UBM7 475 aaKnown RBP22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 NDOR1Q9UHB4 597 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 LHX6Q9UPM6 363 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 ANGPTL3Q9Y5C1 460 aa22.05■■□□□ 1.12
SMARCB1-205ENST00000417137 FREM2Q5SZK8 3169 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 AHCTF1Q8WYP5 2266 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 A0A1B0GX78 115 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 A0A1W2PPM1 405 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 C9J4A7 227 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 DSCR3O14972 297 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 CD63P08962 238 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 TAC1P20366 129 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 GCGRP47871 477 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 CCT5P48643 541 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 VAC14Q08AM6 782 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 NDUFA9Q16795 377 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 C1orf189Q5VU69 101 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 ATG9BQ674R7 924 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 FAM199XQ6PEV8 388 aaPredicted RBP22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 SLCO4C1Q6ZQN7 724 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 CYP4X1Q8N118 509 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 KRT78Q8N1N4 520 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 CT55Q8WUE5 264 aa22.04■■□□□ 1.12
SMARCB1-205ENST00000417137 GBP5Q96PP8 586 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms