RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 TGIF2Q9GZN2 237 aa20.69■□□□□ 0.9
ACTB-203ENST00000417101 PLA2G3Q9NZ20 509 aa20.69■□□□□ 0.9
ACTB-203ENST00000417101 OSGIN2Q9Y236 505 aa20.69■□□□□ 0.9
ACTB-203ENST00000417101 A0A1W2PQ72 361 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 DYTNA2CJ06 578 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 H7BY64 318 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 HAUS5O94927 633 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 STATHP02808 62 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 UQCRHP07919 91 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 EDN3P14138 238 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 FDXRP22570 491 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 IMPA1P29218 277 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 SOX11P35716 441 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 SKIV2L2P42285 1042 aaKnown RBP20.68■□□□□ 0.9
ACTB-203ENST00000417101 MAGEA3P43357 314 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 MPP1Q00013 466 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 MAT1AQ00266 395 aaKnown RBP20.68■□□□□ 0.9
ACTB-203ENST00000417101 FAM180AQ6UWF9 173 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 ZC3H7AQ8IWR0 971 aaKnown RBP20.68■□□□□ 0.9
ACTB-203ENST00000417101 LMNTD2Q8IXW0 634 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 CALML6Q8TD86 181 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 PBKQ96KB5 322 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 PRAP1Q96NZ9 151 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 RIC8BQ9NVN3 520 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 FBXO5Q9UKT4 447 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 MKL2Q9ULH7 1088 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 NEU2Q9Y3R4 380 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 COMMD10Q9Y6G5 202 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 MYO9AB2RTY4 2548 aa20.68■□□□□ 0.9
ACTB-203ENST00000417101 LRRTM2O43300 516 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 CELA2AP08217 269 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 DCTP40126 519 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 SNRPNP63162 240 aaKnown RBP20.67■□□□□ 0.9
ACTB-203ENST00000417101 FAM53BQ14153 422 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 CYP1B1Q16678 543 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 NDUFA9Q16795 377 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 HSP90AA5PQ58FG0 334 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 SIGLEC10Q96LC7 697 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 MAGEB10Q96LZ2 347 aaPredicted RBP20.67■□□□□ 0.9
ACTB-203ENST00000417101 AARSD1Q9BTE6 412 aaKnown RBP20.67■□□□□ 0.9
ACTB-203ENST00000417101 MRPS2Q9Y399 296 aaKnown RBP20.67■□□□□ 0.9
ACTB-203ENST00000417101 JRKLQ9Y4A0 524 aa20.67■□□□□ 0.9
ACTB-203ENST00000417101 DIDO1Q9BTC0 2240 aaKnown RBP20.67■□□□□ 0.9
ACTB-203ENST00000417101 PCDH17O14917 1159 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 WFS1O76024 890 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 BMP10O95393 424 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 AVPR1BP47901 424 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 EFNA3P52797 238 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 PCOLCEQ15113 449 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 RPUSD3Q6P087 351 aaKnown RBP20.66■□□□□ 0.9
ACTB-203ENST00000417101 AMER2Q8N7J2 671 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 BCORP1Q8N888 145 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 NAT8LQ8N9F0 302 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 OR9A4Q8NGU2 314 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 NAP1L3Q99457 506 aaPredicted RBP20.66■□□□□ 0.9
ACTB-203ENST00000417101 SLX1AQ9BQ83 275 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 ZNF700Q9H0M5 742 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 CCDC177Q9NQR7 707 aaPredicted RBP20.66■□□□□ 0.9
ACTB-203ENST00000417101 IARS2Q9NSE4 1012 aaKnown RBP20.66■□□□□ 0.9
ACTB-203ENST00000417101 OLAHQ9NV23 265 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 TRMT6Q9UJA5 497 aaKnown RBP20.66■□□□□ 0.9
ACTB-203ENST00000417101 CACNA1DQ01668 2161 aa20.66■□□□□ 0.9
ACTB-203ENST00000417101 LOC102723996A0A087X1L8 192 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 PGRMC1O00264 195 aaKnown RBP20.65■□□□□ 0.9
ACTB-203ENST00000417101 NRDCO43847 1150 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 F10P00742 488 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 ITGAMP11215 1152 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 TNFSF10P50591 281 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 TBPL1P62380 186 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 TMEM205Q6UW68 189 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 RIPOR1Q6ZS17 1223 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 VN1R4Q7Z5H5 301 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.65■□□□□ 0.98e-11■■□□□ 12.4
ACTB-203ENST00000417101 HAS2Q92819 552 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 FAM167BQ9BTA0 163 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 TMEM184CQ9NVA4 438 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 ZGRF1Q86YA3 2104 aa20.65■□□□□ 0.9
ACTB-203ENST00000417101 TRAV17A0A0B4J275 112 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 EIF3FO00303 357 aaPredicted RBP20.64■□□□□ 0.89
ACTB-203ENST00000417101 JRKO75564 520 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 C8orf89P0DMQ9 161 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 HRH2P25021 359 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 PRSS41Q7RTY9 318 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 PPIL6Q8IXY8 311 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 MCOLN3Q8TDD5 553 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 EEF1AKMT1Q8WVE0 214 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 NDNQ99608 321 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 MACROD1Q9BQ69 325 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.64■□□□□ 0.895e-23■□□□□ 11.1
ACTB-203ENST00000417101 ADAMTS6Q9UKP5 1117 aa20.64■□□□□ 0.89
ACTB-203ENST00000417101 CREBBPQ92793 2442 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 KCNE1BA0A087WTH5 132 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 H0YIG0 161 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 PER3P56645 1201 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 RPS15AP62244 130 aaKnown RBP20.63■□□□□ 0.89
ACTB-203ENST00000417101 TIAL1Q01085 375 aaKnown RBP eCLIP20.63■□□□□ 0.89
ACTB-203ENST00000417101 PTK6Q13882 451 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 MFSD4BQ5TF39 518 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 MBOAT1Q6ZNC8 495 aa20.63■□□□□ 0.89
ACTB-203ENST00000417101 SHISA5Q8N114 240 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms