RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 EPHA8P29322 1005 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-202ENST00000414700 CYLC2Q14093 348 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-202ENST00000414700 CATSPEREQ5SY80 951 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 UGT2A3Q6UWM9 527 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 KANSL1Q7Z3B3 1105 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 MILR1Q7Z6M3 343 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 AMIGO1Q86WK6 493 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 ARL14Q8N4G2 192 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 OR2L8Q8NGY9 312 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 CEP76Q8TAP6 659 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 HBEGFQ99075 208 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 NTMT1Q9BV86 223 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 POT1Q9NUX5 634 aa14.96□□□□□ -0.01
SHMT2-202ENST00000414700 BTN3A3O00478 584 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 FFAR3O14843 346 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 AZIN1O14977 448 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 GPR42O15529 346 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 CAPN1P07384 714 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 FGF4P08620 206 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 RPL5P46777 297 aaKnown RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 CHIT1Q13231 466 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 MMEL1Q495T6 779 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 PRAMEF13Q5VWM6 474 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 KANK2Q63ZY3 851 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 ZC3H14Q6PJT7 736 aaKnown RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 ZNF554Q86TJ5 538 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 KYQ8NBH2 561 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SH3KBP1Q96B97 665 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 BTBD9Q96Q07 612 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 TUBB1Q9H4B7 451 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 ACTR8Q9H981 624 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 GMEB2Q9UKD1 530 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SLC6A14Q9UN76 642 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 UNC13CQ8NB66 2214 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 ARHGAP33O14559 1287 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 EPN2O95208 641 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 VARSP26640 1264 aaKnown RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 HSD17B2P37059 387 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 CLCN2P51788 898 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 AQP4P55087 323 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 PKNOX1P55347 436 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 NAA20P61599 178 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 TBL3Q12788 808 aaKnown RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 TCF15Q12870 199 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 CPSF6Q16630 551 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SLC9B1Q4ZJI4 515 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SCIMPQ6UWF3 145 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 RBM44Q6ZP01 1051 aaKnown RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 TMPRSS11BQ86T26 416 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SLC9B2Q86UD5 537 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 ADGRF3Q8IZF5 1079 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 CLYBLQ8N0X4 340 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 OR2A1Q8NGT9 310 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SAP25Q8TEE9 199 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SMPDL3AQ92484 453 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SPNS1Q9H2V7 528 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 SRMSQ9H3Y6 488 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 FARSBQ9NSD9 589 aaKnown RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 CUEDC1Q9NWM3 386 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-202ENST00000414700 BTRCQ9Y297 605 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 KCNE2Q9Y6J6 123 aa14.95□□□□□ -0.02
SHMT2-202ENST00000414700 C15orf38-AP3S2A0A0A6YYH1 394 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 GIPC1O14908 333 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 HDAC3O15379 428 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 NRP2O60462 931 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 CLDN9O95484 217 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 EBLN1P0CF75 366 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 SLC2A4P14672 509 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 ALOX15P16050 662 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 SHMT2P34897 504 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 FASLGP48023 281 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 HTR6P50406 440 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 ERFP50548 548 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 MEF2AQ02078 507 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 BTKQ06187 659 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 DOC2AQ14183 400 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 XKR6Q5GH73 641 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 OGFOD3Q6PK18 319 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 TMEM26Q6ZUK4 368 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 ARPINQ7Z6K5 226 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 C17orf82Q86X59 251 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 SDR16C5Q8N3Y7 309 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 GPR156Q8NFN8 814 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 HMGCLL1Q8TB92 370 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 METTL6Q8TCB7 284 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 JADE3Q92613 823 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 GFM2Q969S9 779 aaKnown RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 C3orf30Q96M34 536 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 GTPBP2Q9BX10 602 aaKnown RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 WDR55Q9H6Y2 383 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 TMEM165Q9HC07 324 aa14.94□□□□□ -0.02
SHMT2-202ENST00000414700 MDC1Q14676 2089 aaKnown RBP14.94□□□□□ -0.02
SHMT2-202ENST00000414700 GOLGA8QA0A0J9YX86 632 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 ATP6AP2A0A1C7CYW4 349 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 GOLGA8OA6NCC3 632 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 GOLGA8NF8WBI6 632 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 PRICKLE3O43900 615 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-202ENST00000414700 PEX1O43933 1283 aa14.93□□□□□ -0.02
SHMT2-202ENST00000414700 CRCPO75575 148 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms