RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ELLP55199 621 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PER3P56645 1201 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 JAM2P57087 298 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TAS2R60P59551 318 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GNG2P59768 71 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CXCR4P61073 352 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 BNC1Q01954 994 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PTH1RQ03431 593 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ACSM1Q08AH1 577 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 HNRNPA0Q13151 305 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DUSP8Q13202 625 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 MRPL49Q13405 166 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 LSAMPQ13449 338 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TP53BP2Q13625 1128 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FLOT2Q14254 428 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SMCO1Q147U7 214 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CDSNQ15517 529 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PCK2Q16822 640 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 EIF2S3LQ2VIR3 472 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CR1LQ2VPA4 569 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GXYLT1Q4G148 440 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 IQCCQ4KMZ1 466 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 COQ5Q5HYK3 327 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 Q5PR19 223 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 RABGAP1LQ5R372 815 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DDI2Q5TDH0 399 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ARMCX5Q6P1M9 558 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 MSANTD2Q6P1R3 559 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC8BQ6P9F7 803 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM88Q6PEY1 159 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FAM151BQ6UXP7 276 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 NPSR1Q6W5P4 371 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 USP53Q70EK8 1073 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SLC35D2Q76EJ3 337 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 NIPA1Q7RTP0 329 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DCP2Q8IU60 420 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SERPINA12Q8IW75 414 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CCDC28AQ8IWP9 274 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 KBTBD2Q8IY47 623 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SYNE4Q8N205 404 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 UBE2J2Q8N2K1 259 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ZBTB2Q8N680 514 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 METTL25Q8N6Q8 603 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FAM86B1Q8N7N1 296 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TC2NQ8N9U0 490 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GATSQ8NAP1 163 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 OR9K2Q8NGE7 335 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 WDR48Q8TAF3 677 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 AKAP1Q92667 903 aaKnown RBP eCLIP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CPNE4Q96A23 557 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ZBTB8AQ96BR9 441 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SLC7A6OSQ96CW6 309 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ECHDC3Q96DC8 303 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 MTERF3Q96E29 417 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DTD2Q96FN9 168 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 LRRC46Q96FV0 321 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SLC35A4Q96G79 324 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FAM89AQ96GI7 184 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PGAM5Q96HS1 289 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PBKQ96KB5 322 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FAM84BQ96KN1 310 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 LINC00615Q96LM1 132 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CCDC140Q96MF4 163 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 C5orf34Q96MH7 638 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PANX1Q96RD7 426 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 HAPLN3Q96S86 360 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SMOQ99835 787 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ASCL2Q99929 193 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 APOL2Q9BQE5 337 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SEC22CQ9BRL7 303 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CENPKQ9BS16 269 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 C11orf84Q9BUA3 381 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DUSP26Q9BV47 211 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 IL22Q9GZX6 179 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 METTL9Q9H1A3 318 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 FOXP1Q9H334 677 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GAL3ST2Q9H3Q3 398 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SMOC2Q9H3U7 446 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ZMAT4Q9H898 229 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 AKIRIN1Q9H9L7 192 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SEMA4BQ9NPR2 832 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ZFP57Q9NU63 452 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 MED17Q9NVC6 651 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PNPOQ9NVS9 261 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 OSER1Q9NX31 292 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 THUMPD1Q9NXG2 353 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 GTSE1Q9NYZ3 720 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 ERAP1Q9NZ08 941 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 SPG21Q9NZD8 308 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PTGFRNQ9P2B2 879 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 TXNDC16Q9P2K2 825 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 UVRAGQ9P2Y5 699 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 DNAI1Q9UI46 699 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 CRLS1Q9UJA2 301 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 NUDT5Q9UKK9 219 aa3.51□□□□□ -1.85
SF3B1-203ENST00000414174 AGO1Q9UL18 857 aaKnown RBP3.51□□□□□ -1.85
SF3B1-203ENST00000414174 PCDHGB1Q9Y5G3 927 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms