RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 LMF1Q96S06 567 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 SLC30A3Q99726 388 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CCDC77Q9BR77 488 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 SLC25A23Q9BV35 468 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 DRC3Q9H069 523 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 DPH5Q9H2P9 285 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ZDHHC18Q9NUE0 388 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 PSD3Q9NYI0 1048 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 COPG2Q9UBF2 871 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 FETUBQ9UGM5 382 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 TAC3Q9UHF0 121 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ZFP69BQ9UJL9 534 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 ZNF180Q9UJW8 692 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 TLK1Q9UKI8 766 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 PLAGL1Q9UM63 463 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 DYRK1BQ9Y463 629 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 TNPO3Q9Y5L0 923 aaKnown RBP6.1□□□□□ -1.43
USP54-202ENST00000413442 ITPR1Q14643 2758 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CHD6Q8TD26 2715 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 SPTBP11277 2137 aa6.1□□□□□ -1.43
USP54-202ENST00000413442 CCDC88CQ9P219 2028 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 WDFY3Q8IZQ1 3526 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 COL6A6A6NMZ7 2263 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 ASPMQ8IZT6 3477 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 IGKV1-8A0A0C4DH67 115 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 A0A0J9YVX5 310 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 BLACEA4D250 179 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 H7BY64 318 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 CLGNO14967 610 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 FANCGO15287 622 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 KRT38O76015 456 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 S100BP04271 92 aaPredicted RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 SERPINA6P08185 405 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 RBP1P09455 135 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 ZGLP1P0C6A0 271 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 CCDC166P0CW27 439 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 C1GALT1C1LP0DN25 315 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 PRKAR1AP10644 381 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 CASRP41180 1078 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 PIK3CGP48736 1102 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 AGTR2P50052 363 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 GPX6P59796 221 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 NAA20P61599 178 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 STXBP1P61764 594 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 TBPL1P62380 186 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 CSNK1G2P78368 415 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 RGS1Q08116 209 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 TGM3Q08188 693 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 E2F2Q14209 437 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 LY6DQ14210 128 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 RCN2Q14257 317 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 MYBPC3Q14896 1274 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 TGFBIQ15582 683 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 TBCCQ15814 346 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 PPP1R3AQ16821 1122 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 KBTBD12Q3ZCT8 623 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 PAGE2BQ5JRK9 111 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 DCAF10Q5QP82 559 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 HP1BP3Q5SSJ5 553 aaPredicted RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 RBM20Q5T481 1227 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 ATG9BQ674R7 924 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 FAM198BQ6UWH4 519 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 SBSNQ6UWP8 590 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 TRMT10CQ7L0Y3 403 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 ABHD13Q7L211 337 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 TRIM73Q86UV7 250 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 THOC6Q86W42 341 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 GPSM1Q86YR5 675 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 CTAGE3PQ8IX95 158 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 C2orf73Q8N5S3 287 aaPredicted RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 TEX19Q8NA77 164 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 NT5CQ8TCD5 201 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 STT3BQ8TCJ2 826 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 ADAMTS18Q8TE60 1221 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 FBF1Q8TES7 1133 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 SLC13A3Q8WWT9 602 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 METTL21AQ8WXB1 218 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 FAM136AQ96C01 138 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 MTBPQ96DY7 904 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 WDR34Q96EX3 536 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 PRAP1Q96NZ9 151 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 FMO2Q99518 471 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 NDNQ99608 321 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 SMAD5Q99717 465 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 EGFL8Q99944 293 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 EFCAB11Q9BUY7 163 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 ACAT2Q9BWD1 397 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 NPLQ9BXD5 320 aaPredicted RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 ROGDIQ9GZN7 287 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 KLHL25Q9H0H3 589 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 ACSS3Q9H6R3 686 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 AKIRIN1Q9H9L7 192 aaPredicted RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 ANKHQ9HCJ1 492 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 SLC6A20Q9NP91 592 aa6.09□□□□□ -1.43
USP54-202ENST00000413442 DHCR7Q9UBM7 475 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 C19orf25Q9UFG5 118 aaPredicted RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 PTRH2Q9Y3E5 179 aaKnown RBP6.09□□□□□ -1.43
USP54-202ENST00000413442 TSC22D4Q9Y3Q8 395 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms