RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TUBBP07437 444 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 HNRNPCP07910 306 aaKnown RBP eCLIP6.04□□□□□ -1.44
LSM5-203ENST00000409782 SRPRAP08240 638 aaKnown RBP6.04□□□□□ -1.44
LSM5-203ENST00000409782 CCDC175P0C221 793 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ZNF806P0C7X5 589 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SLC2A4P14672 509 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 GABRG2P18507 467 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 MAKP20794 623 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 BCKDHBP21953 392 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 HLA-FP30511 346 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CCR1P32246 355 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 PTGS2P35354 604 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 GRIA3P42263 894 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 TNNT3P45378 269 aaPredicted RBP6.04□□□□□ -1.44
LSM5-203ENST00000409782 CENPAP49450 140 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CAMPP49913 170 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SGSHP51688 502 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 LIMK1P53667 647 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ARSFP54793 590 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 F2RL1P55085 397 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 EIF4EBP2Q13542 120 aaPredicted RBP6.04□□□□□ -1.44
LSM5-203ENST00000409782 CDH18Q13634 790 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 FGFBP1Q14512 234 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ZNF234Q14588 700 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ANXA2RQ3ZCQ2 193 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 FUT11Q495W5 492 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 MS4A13Q5J8X5 152 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 RABGAP1LQ5R372 815 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SYPL2Q5VXT5 272 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 TMEM268Q5VZI3 342 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 KAZNQ674X7 775 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 NADSYN1Q6IA69 706 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 PLBD1Q6P4A8 553 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 RFWD3Q6PCD5 774 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SERPINA13PQ6UXR4 307 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SLC36A4Q6YBV0 504 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 TRIM72Q6ZMU5 477 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CFAP77Q6ZQR2 320 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 LPCAT2Q7L5N7 544 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 GPAT4Q86UL3 456 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ZSCAN30Q86W11 494 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CHSY1Q86X52 802 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 MFN1Q8IWA4 741 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 DEFB106AQ8N104 65 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ATP6V0D2Q8N8Y2 350 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 FAM47BQ8NA70 645 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 GOT1L1Q8NHS2 421 aaPredicted RBP6.04□□□□□ -1.44
LSM5-203ENST00000409782 Q96MF0 132 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SPAG5Q96R06 1193 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ZNF347Q96SE7 839 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ACOX2Q99424 681 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 IFT27Q9BW83 186 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 KLHL4Q9C0H6 718 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 GRPEL1Q9HAV7 217 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 ZDHHC4Q9NPG8 344 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 FAM207AQ9NSI2 230 aaPredicted RBP6.04□□□□□ -1.44
LSM5-203ENST00000409782 ABCB8Q9NUT2 735 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 DDIT4Q9NX09 232 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 NLKQ9UBE8 527 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 SLC12A6Q9UHW9 1150 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 NOCTQ9UK39 431 aaKnown RBP6.04□□□□□ -1.44
LSM5-203ENST00000409782 ACAD8Q9UKU7 415 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CLEC4EQ9ULY5 219 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 STAP1Q9ULZ2 295 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 NENFQ9UMX5 172 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CARD8Q9Y2G2 431 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 HS3ST3A1Q9Y663 406 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 CACNA1EQ15878 2313 aa6.04□□□□□ -1.44
LSM5-203ENST00000409782 GON4LQ3T8J9 2241 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 IGHV1OR15-9A0A0B4J2B8 117 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 A0A1B0GVM2 712 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 KCNU1A8MYU2 1149 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 SLC30A4O14863 429 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 EPHB6O15197 1021 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 AP5Z1O43299 807 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 MITFO75030 526 aaPredicted RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 USP12O75317 370 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 LUC7L3O95232 432 aaKnown RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 IGLV3-19P01714 112 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 ATP5BP06576 529 aaKnown RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 ABCB1P08183 1280 aaPredicted RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 ATP6V1B1P15313 513 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 MATKP42679 507 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 KLK7P49862 253 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 GSCP56915 257 aaPredicted RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 POLR2FP61218 127 aaKnown RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 RPS24P62847 133 aaKnown RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 PITX1P78337 314 aaPredicted RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 CDR2Q01850 454 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 SNTB1Q13884 538 aaKnown RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 SYCP1Q15431 976 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 DCAF6Q58WW2 860 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 PCID2Q5JVF3 399 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 COLEC12Q5KU26 742 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 BRMS1LQ5PSV4 323 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 OTUD1Q5VV17 481 aaPredicted RBP6.03□□□□□ -1.44
LSM5-203ENST00000409782 TAF3Q5VWG9 929 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 LYSMD4Q5XG99 296 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 TMEM215Q68D42 235 aa6.03□□□□□ -1.44
LSM5-203ENST00000409782 OR6B2Q6IFH4 312 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms