RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 YY2O15391 372 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 H6PDO95479 791 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 LAMP1P11279 417 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 MYCLP1P12525 358 aaPredicted RBP19.4■□□□□ 0.7
USP39-204ENST00000409766 HYAL1Q12794 435 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 ITPRIPL2Q3MIP1 535 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 C2orf27AQ580R0 203 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 PAGE2BQ5JRK9 111 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 GALNT18Q6P9A2 607 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 FAM47BQ8NA70 645 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 CDC26Q8NHZ8 85 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 NETO1Q8TDF5 533 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 SLC5A11Q8WWX8 675 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 MRPL38Q96DV4 380 aaKnown RBP19.4■□□□□ 0.7
USP39-204ENST00000409766 CCDC177Q9NQR7 707 aaPredicted RBP19.4■□□□□ 0.7
USP39-204ENST00000409766 SMPD3Q9NY59 655 aaPredicted RBP19.4■□□□□ 0.7
USP39-204ENST00000409766 SZT2Q5T011 3432 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 NUMA1Q14980 2115 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 CEP290O15078 2479 aa19.39■□□□□ 0.7
USP39-204ENST00000409766 A0A1B0GTW7 788 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 PIPSLA2A3N6 862 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 PRKD3O94806 890 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 PCDH8O95206 1070 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 C1QCP02747 245 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 MYF6P23409 242 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 ANKRD26P1Q6NSI1 321 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 NXPE4Q6UWF7 544 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 NUDT18Q6ZVK8 323 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 CAMKMTQ7Z624 323 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 SERPINA11Q86U17 422 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 LRRTM4Q86VH4 590 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 OR5AR1Q8NGP9 310 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 MAGEE2Q8TD90 523 aaPredicted RBP19.39■□□□□ 0.69
USP39-204ENST00000409766 RAD51AP1Q96B01 352 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 SLC47A1Q96FL8 570 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 RPP25Q9BUL9 199 aaKnown RBP19.39■□□□□ 0.69
USP39-204ENST00000409766 EPB41L1Q9H4G0 881 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 SERGEFQ9UGK8 458 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 GABRR3A8MPY1 467 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 EVPLLA8MZ36 301 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 H3BNH8 94 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 CLIC1O00299 241 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 ATP6V1B1P15313 513 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 IL1RNP18510 177 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 NELFEP18615 380 aaKnown RBP19.39■□□□□ 0.69
USP39-204ENST00000409766 TIA1P31483 386 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP39-204ENST00000409766 MTHFRP42898 656 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 AGERQ15109 404 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 TMEM214Q6NUQ4 689 aaKnown RBP19.39■□□□□ 0.69
USP39-204ENST00000409766 CLECL1Q8IZS7 167 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 OXR1Q8N573 874 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 GPR156Q8NFN8 814 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 SETD7Q8WTS6 366 aaKnown RBP19.39■□□□□ 0.69
USP39-204ENST00000409766 NCLNQ969V3 563 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 TMBIM1Q969X1 311 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 SIRT5Q9NXA8 310 aa19.39■□□□□ 0.69
USP39-204ENST00000409766 SMIM31A0A1B0GVY4 71 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 PI15O43692 258 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 LAMP2P13473 410 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 ENGP17813 658 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 C5AR1P21730 350 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 HKDC1Q2TB90 917 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 CYBRD1Q53TN4 286 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 GPR155Q7Z3F1 870 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 METTL25Q8N6Q8 603 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 ZNF513Q8N8E2 541 aaPredicted RBP19.38■□□□□ 0.69
USP39-204ENST00000409766 TFGQ92734 400 aaPredicted RBP19.38■□□□□ 0.69
USP39-204ENST00000409766 IL17FQ96PD4 163 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 TSC22D3Q99576 134 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 DUSP26Q9BV47 211 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 TEX101Q9BY14 249 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 SPNS1Q9H2V7 528 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 MAGIXQ9H6Y5 334 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 DMRT3Q9NQL9 472 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 MBNL1Q9NR56 388 aaKnown RBP19.38■□□□□ 0.69
USP39-204ENST00000409766 TM7SF3Q9NS93 570 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 UTS2RQ9UKP6 389 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 MAPRE3Q9UPY8 281 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 MYRFQ9Y2G1 1151 aa19.38■□□□□ 0.69
USP39-204ENST00000409766 PCDH7O60245 1069 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 ADH1BP00325 375 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 SERPINA1P01009 418 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 GPX2P18283 190 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 KELP23276 732 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 HIST2H2ACQ16777 129 aaPredicted RBP19.37■□□□□ 0.69
USP39-204ENST00000409766 ATAT1Q5SQI0 421 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 CPTPQ5TA50 214 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 METRNLQ641Q3 311 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 HIST2H2AA3Q6FI13 130 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 ZNF621Q6ZSS3 439 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 DCUN1D3Q8IWE4 304 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 HDDC3Q8N4P3 179 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 POP5Q969H6 163 aaKnown RBP19.37■□□□□ 0.69
USP39-204ENST00000409766 SH3KBP1Q96B97 665 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 COQ8BQ96D53 544 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 PRM3Q9NNZ6 103 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 CD320Q9NPF0 282 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 NDUFA13Q9P0J0 144 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 DNAJB9Q9UBS3 223 aa19.37■□□□□ 0.69
USP39-204ENST00000409766 DNMT3AQ9Y6K1 912 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms