RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 PELI2Q9HAT8 420 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SLC6A20Q9NP91 592 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 DMRT3Q9NQL9 472 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 FSCN3Q9NQT6 498 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 DLGAP4Q9Y2H0 992 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 SNX11Q9Y5W9 270 aa11.97□□□□□ -0.49
CHMP3-204ENST00000409727 CFAP73A6NFT4 308 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 OR5K4A6NMS3 321 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 FBP2O00757 339 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 PRICKLE3O43900 615 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-204ENST00000409727 SERPIND1P05546 499 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 BCKDHAP12694 445 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 HOXB3P14651 431 aaPredicted RBP11.96□□□□□ -0.49
CHMP3-204ENST00000409727 AMD1P17707 334 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 ITGAXP20702 1163 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 CAPN3P20807 821 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 IL12AP29459 219 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 CPOXP36551 454 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 ACADVLP49748 655 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 HNRNPKP61978 463 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHMP3-204ENST00000409727 CSNK1G2P78368 415 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 BIRC2Q13490 618 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 ART3Q13508 389 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 REP15Q6BDI9 236 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 CEP68Q76N32 757 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 VN1R5Q7Z5H4 357 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 TRIM73Q86UV7 250 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 HOMEZQ8IX15 550 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 DEFB107AQ8IZN7 70 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 C1orf52Q8N6N3 182 aaKnown RBP11.96□□□□□ -0.49
CHMP3-204ENST00000409727 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 ANKRD53Q8N9V6 530 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 PROKR1Q8TCW9 393 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 PIGKQ92643 395 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 GFM2Q969S9 779 aaKnown RBP11.96□□□□□ -0.49
CHMP3-204ENST00000409727 CLPTM1LQ96KA5 538 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 TSSK3Q96PN8 268 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 DPH7Q9BTV6 452 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 SLC25A23Q9BV35 468 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 KLHL25Q9H0H3 589 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 BRF2Q9HAW0 419 aa11.96□□□□□ -0.49
CHMP3-204ENST00000409727 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.96□□□□□ -0.49
CHMP3-204ENST00000409727 ANKDD1BA6NHY2 528 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 CFLARO15519 480 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 LRATO95237 230 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 GBAP04062 536 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 GNSP15586 552 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 TYRP1P17643 537 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 CXCR2P25025 360 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 TACR1P25103 407 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 CMPK1P30085 196 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PGM1P36871 562 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PPM1FP49593 454 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-204ENST00000409727 POLR2JP52435 117 aaKnown RBP11.95□□□□□ -0.5
CHMP3-204ENST00000409727 KCNK10P57789 538 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PHEXP78562 749 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 REEP5Q00765 189 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ACSM2AQ08AH3 577 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 STX5Q13190 355 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PLK5Q496M5 336 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 TIGD2Q4W5G0 525 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ACSM2BQ68CK6 577 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 BLOC1S3Q6QNY0 202 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 KRTCAP2Q8N6L1 136 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 KYQ8NBH2 561 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 NELL1Q92832 810 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ACTL8Q9H568 366 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 EFCAB1Q9HAE3 211 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 IL1RL2Q9HB29 575 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ZDBF2Q9HCK1 2354 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 A0A1B0GTW7 788 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 SERTM1A2A2V5 107 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 FOXE1O00358 373 aaPredicted RBP11.95□□□□□ -0.5
CHMP3-204ENST00000409727 HAT1O14929 419 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ANGPT2O15123 496 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 LCMT2O60294 686 aaKnown RBP11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PIAS2O75928 621 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ANXA6P08133 673 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 HSD3B1P14060 373 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 UGT2B7P16662 529 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 SDC1P18827 310 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PRPH2P23942 346 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 HSD3B2P26439 372 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 GRIA3P42263 894 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ZNF33BQ06732 778 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 CYP4F3Q08477 520 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 BNIP3Q12983 259 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 NOXRED1Q6NXP6 359 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 TMEM26Q6ZUK4 368 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 DSELQ8IZU8 1212 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 ARL14Q8N4G2 192 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 OR4K1Q8NGD4 311 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 SPDL1Q96EA4 605 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 EGLN2Q96KS0 407 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 PPM1MQ96MI6 270 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 MACROD1Q9BQ69 325 aa11.95□□□□□ -0.5
CHMP3-204ENST00000409727 DPY30Q9C005 99 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms