RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C8orf4Q9NR00 106 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 C1orf109Q9NX04 203 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 GMPPBQ9Y5P6 360 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 FUOMA2VDF0 154 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ANKDD1BA6NHY2 528 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 E7EQ34 232 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 SLC1A7O00341 560 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ENGP17813 658 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 CYP2A7P20853 494 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 CD300CQ08708 224 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 HSPB3Q12988 150 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 GRIK2Q13002 908 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 MPPE1Q53F39 396 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-204ENST00000409416 SLC7A5P1Q8MH63 180 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 MMP21Q8N119 569 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 ABHD11Q8NFV4 315 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 KCNC2Q96PR1 638 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 MBOAT4Q96T53 435 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 MIEF1Q9NQG6 463 aa12.97□□□□□ -0.33
COL6A2-204ENST00000409416 WASHC1A8K0Z3 465 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 K7ESM1 405 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 SLC28A1O00337 649 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 SLC31A1O15431 190 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 SLC16A8O95907 504 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 IGLV3-27P01718 113 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 C7P10643 843 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 KIR3DL1P43629 444 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 XAF1Q6GPH4 301 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 WASH2PQ6VEQ5 465 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 NDNFQ8TB73 568 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 POF1BQ8WVV4 589 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 CD244Q9BZW8 370 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 TPK1Q9H3S4 243 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 FZD3Q9NPG1 666 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 STOX2Q9P2F5 926 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-204ENST00000409416 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 H3BM21 787 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 H3BNC9 293 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 ZNF197O14709 1029 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 KDM1AO60341 852 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 JAK1P23458 1154 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 GPC1P35052 558 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 TGFBR1P36897 503 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 RXRGP48443 463 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 AQP6Q13520 282 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 USP51Q70EK9 711 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 ZCCHC7Q8N3Z6 543 aaKnown RBP12.96□□□□□ -0.33
COL6A2-204ENST00000409416 DPP10Q8N608 796 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 PAPD5Q8NDF8 572 aaKnown RBP12.96□□□□□ -0.33
COL6A2-204ENST00000409416 EXOSC8Q96B26 276 aaKnown RBP12.96□□□□□ -0.33
COL6A2-204ENST00000409416 TAMM41Q96BW9 452 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 DHRS1Q96LJ7 313 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.33
COL6A2-204ENST00000409416 OSBPL10Q9BXB5 764 aa12.96□□□□□ -0.33
COL6A2-204ENST00000409416 MAGEB17A8MXT2 336 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 VIPP01282 170 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ADH1AP07327 375 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 CR2P20023 1033 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 TMBIM6P55061 237 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 MAD2L1Q13257 205 aaPredicted RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 RBM48Q5RL73 367 aaKnown RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 P3H2Q8IVL5 708 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF614Q8N883 585 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 OR8J3Q8NGG0 315 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ACPTQ9BZG2 426 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 SCN3BQ9NY72 215 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ABCG2Q9UNQ0 655 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 RFXAPO00287 272 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 IL6P05231 212 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 C8orf89P0DMQ9 161 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ACRV1P26436 265 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 NSG1P42857 185 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 CLK1P49759 484 aaKnown RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 RPS13P62277 151 aaKnown RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 NPTX1Q15818 432 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 HDAC2Q92769 488 aaKnown RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 FATE1Q969F0 183 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 RMND5AQ9H871 391 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 TDP1Q9NUW8 608 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 PCDHB1Q9Y5F3 818 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 KNTC1P50748 2209 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 FEZF1A0PJY2 475 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF701M0R085 212 aaPredicted RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 EPN2O95208 641 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 RHOP08100 348 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 LAMP1P11279 417 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 NCS1P62166 190 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 TRAF7Q6Q0C0 670 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 MSRB3Q8IXL7 192 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 DCAF4L2Q8NA75 395 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 PSMA8Q8TAA3 256 aa12.95□□□□□ -0.34
COL6A2-204ENST00000409416 ISG20Q96AZ6 181 aaKnown RBP12.95□□□□□ -0.34
COL6A2-204ENST00000409416 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms