RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ANXA5P08758 320 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 TMEM253P0C7T8 217 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 NME2P22392 152 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 MEOX1P50221 254 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 SNRPNP63162 240 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 ZBED6P86452 979 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 MAPKAPK3Q16644 382 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 CCSMST1Q4G0I0 132 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 TMEM198Q66K66 360 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 FBXO42Q6P3S6 717 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 LRRC8BQ6P9F7 803 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 SHISA5Q8N114 240 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 CSNK1A1LQ8N752 337 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 HMGCLL1Q8TB92 370 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 METTL21AQ8WXB1 218 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 RND1Q92730 232 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 RMND5BQ96G75 393 aaPredicted RBP12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 OLFM1Q99784 485 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 GPATCH1Q9BRR8 931 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 DRC3Q9H069 523 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC24A3Q9HC58 644 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 L3MBTL1Q9Y468 752 aa12.12□□□□□ -0.47
CHRNA1-203ENST00000409219 MFAP3LO75121 409 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC25A12O75746 678 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 SUN1O94901 812 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 DNASE1P24855 282 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 BDKRB1P46663 353 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC18A3Q16572 532 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 ANKRD20A2Q5SQ80 823 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 ANKRD20A1Q5TYW2 823 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 ZNF468Q5VIY5 522 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 ANKRD20A3Q5VUR7 823 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 CNGA4Q8IV77 575 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 HORMAD2Q8N7B1 307 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 WFDC11Q8NEX6 87 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 STYXQ8WUJ0 223 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 ARSGQ96EG1 525 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 CYTH2Q99418 400 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 DPH7Q9BTV6 452 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 C19orf25Q9UFG5 118 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 FEZ2Q9UHY8 353 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 ZNF407Q9C0G0 2248 aa12.11□□□□□ -0.47
CHRNA1-203ENST00000409219 GOLGA6L9A6NEM1 432 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 H7C0C1 242 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 TFECO14948 347 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ZSCAN12O43309 604 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 VPS26AO75436 327 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 GYPCP04921 128 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 TPM1P09493 284 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 TPH1P17752 444 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ATP5OP48047 213 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 DLX5P56178 289 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 PRPSAP1Q14558 356 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 POU6F1Q14863 301 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 MINDY4Q4G0A6 757 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 EMC4Q5J8M3 183 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 GARNL3Q5VVW2 1013 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ANKRD37Q7Z713 158 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ZNF227Q86WZ6 799 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 CCDC50Q8IVM0 306 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 KLHDC8BQ8IXV7 354 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ZZZ3Q8IYH5 903 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC5A8Q8N695 610 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ASZ1Q8WWH4 475 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 RAD51AP1Q96B01 352 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 ACAT2Q9BWD1 397 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 CLEC4MQ9H2X3 399 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 MMP25Q9NPA2 562 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 TRMT1Q9NXH9 659 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 CAPN11Q9UMQ6 739 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 NFS1Q9Y697 457 aa12.1□□□□□ -0.47
CHRNA1-203ENST00000409219 OR2W5A6NFC9 320 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 IQCF5A8MTL0 148 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 P2RX6O15547 441 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 SPOPO43791 374 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 HS6ST1O60243 411 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 CDC40O60508 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 CYC1P08574 325 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 PSMA3P25788 255 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 CMPK1P30085 196 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 SLC1A1P43005 524 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 NUP107P57740 925 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 CMPK2Q5EBM0 449 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 MFSD4BQ5TF39 518 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 M1APQ8TC57 530 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 MBD6Q96DN6 1003 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 PLCD4Q9BRC7 762 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 RUVBL2Q9Y230 463 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 COL6A5A8TX70 2615 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 STAB1Q9NY15 2570 aa12.09□□□□□ -0.47
CHRNA1-203ENST00000409219 IGKV1-8A0A0C4DH67 115 aa12.08□□□□□ -0.47
CHRNA1-203ENST00000409219 CCDC162PA2VCL2 907 aa12.08□□□□□ -0.47
CHRNA1-203ENST00000409219 APOC4-APOC2K7ER74 178 aa12.08□□□□□ -0.47
CHRNA1-203ENST00000409219 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.47
CHRNA1-203ENST00000409219 PSTPIP1O43586 416 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms