RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SLC25A37Q9NYZ2 338 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 MAGEL2Q9UJ55 1249 aa18.26■□□□□ 0.51
USP39-202ENST00000409025 LRRC72A6NJI9 287 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 GPIP06744 558 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 COX7A2P14406 83 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 NCK1P16333 377 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 TIA1P31483 386 aaKnown RBP eCLIP18.25■□□□□ 0.51
USP39-202ENST00000409025 GTF2A1P52655 376 aaPredicted RBP18.25■□□□□ 0.51
USP39-202ENST00000409025 KRT33BQ14525 404 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 OR4F3Q6IEY1 312 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 TMIGD1Q6UXZ0 262 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 MSRB3Q8IXL7 192 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 ICA1LQ8NDH6 482 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 LRTOMTQ8WZ04 291 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 NELL1Q92832 810 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 USP22Q9UPT9 525 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 AURKCQ9UQB9 309 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 TRBV5-3A0A0A0MS03 114 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 PRSS38A1L453 326 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 POM121BA6NF01 834 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 PRR19A6NJB7 356 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 PDZK1P1A8MUH7 402 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 GABRG2P18507 467 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 CXCR2P25025 360 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 SOX11P35716 441 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 HNRNPFP52597 415 aaKnown RBP18.25■□□□□ 0.51
USP39-202ENST00000409025 AQP4P55087 323 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 CLDN2P57739 230 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 MLF2Q15773 248 aaPredicted RBP18.25■□□□□ 0.51
USP39-202ENST00000409025 UGT8Q16880 541 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 TBCELQ5QJ74 424 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 GLYATQ6IB77 296 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 ANKRD46Q86W74 232 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 FAM129CQ86XR2 697 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 TNIP2Q8NFZ5 429 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 OR7A2PQ8NGA2 310 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 ZNF583Q96ND8 569 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 CAMK1GQ96NX5 476 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 GBP5Q96PP8 586 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 OR2M4Q96R27 311 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 UBE2ZQ9H832 354 aaPredicted RBP18.25■□□□□ 0.51
USP39-202ENST00000409025 CARS2Q9HA77 564 aaKnown RBP18.25■□□□□ 0.51
USP39-202ENST00000409025 FGF22Q9HCT0 170 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 SIRT5Q9NXA8 310 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 PCDHB14Q9Y5E9 798 aa18.25■□□□□ 0.51
USP39-202ENST00000409025 GNG14A0A1W2PPG7 69 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 SHISA7A6NL88 538 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 HNRNPRO43390 633 aaKnown RBP18.24■□□□□ 0.51
USP39-202ENST00000409025 PCDH7O60245 1069 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 GMNNO75496 209 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 TGFB1P01137 390 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 CAPNS1P04632 268 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 UMPSP11172 480 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 CD72P21854 359 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 CTBSQ01459 385 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 CYP51A1Q16850 503 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 UAP1L1Q3KQV9 507 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 GALNT18Q6P9A2 607 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 OR2T12Q8NG77 320 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 PPWD1Q96BP3 646 aaKnown RBP18.24■□□□□ 0.51
USP39-202ENST00000409025 NRTNQ99748 197 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 AIF1LQ9BQI0 150 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 INPP5KQ9BT40 448 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 RAB11FIP5Q9BXF6 653 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 REXO4Q9GZR2 422 aaKnown RBP18.24■□□□□ 0.51
USP39-202ENST00000409025 MVB12BQ9H7P6 319 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 ADGRE2Q9UHX3 823 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 CROCCQ5TZA2 2017 aa18.24■□□□□ 0.51
USP39-202ENST00000409025 TCRBV5S2A0A599 114 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 RFXANKO14593 260 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 SCAMP2O15127 329 aaKnown RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 HNRNPA2B1P22626 353 aaKnown RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 HRH2P25021 359 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 HPCAL1P37235 193 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 MAP7Q14244 749 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 NFATC4Q14934 902 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 CLCA4Q14CN2 919 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 RBBP5Q15291 538 aaKnown RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 GTDC1Q4AE62 458 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 ENPP7Q6UWV6 458 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 ADGRG5Q8IZF4 528 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 ZNF740Q8NDX6 193 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 OR8J2Q8NGG1 315 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 OR10A6Q8NH74 314 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 HMGB4Q8WW32 186 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 NSMCE2Q96MF7 247 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 VCXQ9H320 206 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 WASH6PQ9NQA3 447 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 FAM120CQ9NX05 1096 aaKnown RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 INVSQ9Y283 1065 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 A0A1W2PPV9 198 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 TIPRLO75663 272 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 PTX3P26022 381 aaPredicted RBP18.23■□□□□ 0.51
USP39-202ENST00000409025 HTR1BP28222 390 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 TRPC1P48995 793 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 RAB28P51157 221 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 CCR8P51685 355 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 DUOXA1Q1HG43 343 aa18.23■□□□□ 0.51
USP39-202ENST00000409025 HKDC1Q2TB90 917 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms