RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PCNAP12004 261 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 PVRP15151 417 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 CXCR2P25025 360 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 GFERP55789 205 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 GABPB1Q06547 395 aaPredicted RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 SLC14A1Q13336 389 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 XKR7Q5GH72 579 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 TMIGD1Q6UXZ0 262 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 RNF165Q6ZSG1 346 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 PAQR7Q86WK9 346 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 PLD3Q8IV08 490 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 LAS2Q8IYD9 372 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 CCT6BQ92526 530 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 NCSTNQ92542 709 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 UBE2E3Q969T4 207 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 REPS1Q96D71 796 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 MAELQ96JY0 434 aaKnown RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 PLCD4Q9BRC7 762 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 ZMYND15Q9H091 742 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 KLHL25Q9H0H3 589 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 SNX7Q9UNH6 387 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 GOLGA4Q13439 2230 aaKnown RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 OTOGLQ3ZCN5 2332 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 PCM1Q15154 2024 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 CASC3O15234 703 aaKnown RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 TNFSF14O43557 240 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 HOXB3P14651 431 aaPredicted RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 CSF2RBP32927 897 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 DDX39BQ13838 428 aaKnown RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 RBBP5Q15291 538 aaKnown RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 AASDHQ4L235 1098 aaPredicted RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 HOMEZQ8IX15 550 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.65■□□□□ 0.744e-6■□□□□ 8.2
CHKB-201ENST00000406938 RNF175Q8N4F7 328 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 OR2T11Q8NH01 316 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 SEC16BQ96JE7 1060 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 TGM7Q96PF1 710 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 OR52B2Q96RD2 323 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 MTERF1Q99551 399 aaKnown RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 CCT7Q99832 543 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 CCDC3Q9BQI4 270 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 PITHD1Q9GZP4 211 aaPredicted RBP19.65■□□□□ 0.74
CHKB-201ENST00000406938 RAB33BQ9H082 229 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 EPHA6Q9UF33 1036 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 KLK4Q9Y5K2 254 aa19.65■□□□□ 0.74
CHKB-201ENST00000406938 OR2A25A4D2G3 310 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 ZW10O43264 779 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 CD59P13987 128 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 CDH3P22223 829 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 TGM1P22735 817 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 CD1CP29017 333 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 GRK3P35626 688 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 DUSP3P51452 185 aaPredicted RBP19.64■□□□□ 0.73
CHKB-201ENST00000406938 NAA25Q14CX7 972 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 FCRL6Q6DN72 434 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 FAM92BQ6ZTR7 304 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 ANKRD53Q8N9V6 530 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 CCDC197Q8NCU1 140 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 HUS1BQ8NHY5 278 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 IFI44Q8TCB0 444 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 RHBDD1Q8TEB9 315 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 CNDP2Q96KP4 475 aaKnown RBP19.64■□□□□ 0.73
CHKB-201ENST00000406938 TCF7L2Q9NQB0 619 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 PFDN4Q9NQP4 134 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 ANKMY1Q9P2S6 941 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 ARL2BPQ9Y2Y0 163 aa19.64■□□□□ 0.73
CHKB-201ENST00000406938 TRBC2A0A5B9 178 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 OR1F1O43749 312 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 SNRNP200O75643 2136 aaKnown RBP19.63■□□□□ 0.73
CHKB-201ENST00000406938 BCL6P41182 706 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 CFHR1Q03591 330 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 FIGLAQ6QHK4 219 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 ACAD11Q709F0 780 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 TRIM46Q7Z4K8 759 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 NAXDQ8IW45 347 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 CACNA2D3Q8IZS8 1091 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 BAHD1Q8TBE0 780 aaPredicted RBP19.63■□□□□ 0.73
CHKB-201ENST00000406938 STON2Q8WXE9 905 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 ZDHHC12Q96GR4 267 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 RILPQ96NA2 401 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 MAP3K3Q99759 626 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 ACPTQ9BZG2 426 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 SEMA6CQ9H3T2 930 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 PRM3Q9NNZ6 103 aa19.63■□□□□ 0.73
CHKB-201ENST00000406938 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.63■□□□□ 0.73
CHKB-201ENST00000406938 APOBEC2Q9Y235 224 aaKnown RBP19.63■□□□□ 0.73
CHKB-201ENST00000406938 KIF1CO43896 1103 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 LDOC1O95751 146 aaPredicted RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 EZRP15311 586 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 ST6GAL1P15907 406 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 HMGCS1Q01581 520 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 ZNF33BQ06732 778 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 TUBB3Q13509 450 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 ZIC1Q15915 447 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 C10orf62Q5T681 223 aaPredicted RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 USP53Q70EK8 1073 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 VN1R5Q7Z5H4 357 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 ZUFSPQ96AP4 578 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 TUBGCP3Q96CW5 907 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 SARGQ9BW04 601 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms