RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PLD3Q8IV08 490 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 CCDC71Q8IV32 467 aaPredicted RBP19.21■□□□□ 0.67
CCDC47-202ENST00000403162 ZZZ3Q8IYH5 903 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 TCEAL8Q8IYN2 117 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 HPS1Q92902 700 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 SP140LQ9H930 580 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 SLC28A3Q9HAS3 691 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 KIF17Q9P2E2 1029 aa19.21■□□□□ 0.67
CCDC47-202ENST00000403162 FCF1Q9Y324 198 aaKnown RBP19.21■□□□□ 0.67
CCDC47-202ENST00000403162 SAMHD1Q9Y3Z3 626 aaKnown RBP19.21■□□□□ 0.67
CCDC47-202ENST00000403162 ISPDA4D126 451 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 hCG_2039718K7EN88 272 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 WBP4O75554 376 aaKnown RBP19.2■□□□□ 0.66
CCDC47-202ENST00000403162 PPP3CCP48454 512 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ITGA1P56199 1179 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ABRQ12979 859 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 BCL2A1Q16548 175 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 CATSPEREQ5SY80 951 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ZCCHC8Q6NZY4 707 aaKnown RBP19.2■□□□□ 0.66
CCDC47-202ENST00000403162 DSG4Q86SJ6 1040 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 FCGR1BQ92637 280 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 RPL3LQ92901 407 aaKnown RBP19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ZHX1-C8orf76Q96EF9 292 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ELOVL6Q9H5J4 265 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 GKN1Q9NS71 199 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 CRLS1Q9UJA2 301 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 MAFFQ9ULX9 164 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 INSL5Q9Y5Q6 135 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 CHD7Q9P2D1 2997 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 EFCAB9A8MZ26 197 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 DPM1O60762 260 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 KCNK5O95279 499 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 MZF1P28698 734 aaPredicted RBP19.2■□□□□ 0.66
CCDC47-202ENST00000403162 EPHA2P29317 976 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 KDELR2P33947 212 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 UGT2B10P36537 528 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 TUBA1BP68363 451 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 DUOXA1Q1HG43 343 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 GPR33Q49SQ1 333 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 OR4F3Q6IEY1 312 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 TUBA1AQ71U36 451 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 CBLL1Q75N03 491 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 EIF3MQ7L2H7 374 aaKnown RBP19.2■□□□□ 0.66
CCDC47-202ENST00000403162 LRRC70Q7Z2Q7 622 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 GPR155Q7Z3F1 870 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ARMC8Q8IUR7 673 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 SLC38A4Q969I6 547 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 DACH2Q96NX9 599 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 ITPAQ9BY32 194 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 CPNE5Q9HCH3 593 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 KCTD5Q9NXV2 234 aa19.2■□□□□ 0.66
CCDC47-202ENST00000403162 GLYATL1P3A0A0U1RQE8 302 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 CLIC1O00299 241 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 FKBP9O95302 570 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 BPIP17213 487 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 GPX2P18283 190 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 KIR3DL1P43629 444 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 NPRL3Q12980 569 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 TMEM53Q6P2H8 277 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 TUBA3EQ6PEY2 450 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 CPA6Q8N4T0 437 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 ATG16L2Q8NAA4 619 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 MCFD2Q8NI22 146 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 EFHD2Q96C19 240 aaPredicted RBP19.19■□□□□ 0.66
CCDC47-202ENST00000403162 KLHL42Q9P2K6 505 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 CHD9Q3L8U1 2897 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 UPK1BO75841 260 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 DIRAS1O95057 198 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 TRBC1P01850 177 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 LCKP06239 509 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 RPIAP49247 311 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 VEPH1Q14D04 833 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 TAF12Q16514 161 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 CDKN3Q16667 212 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 LILRA6Q6PI73 481 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 VTCN1Q7Z7D3 282 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 NXPE1Q8N323 547 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 APH1BQ8WW43 257 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 PYCR2Q96C36 320 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 HSH2DQ96JZ2 352 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 MMP27Q9H306 513 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 REEP1Q9H902 201 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 SACM1LQ9NTJ5 587 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 ARL15Q9NXU5 204 aa19.19■□□□□ 0.66
CCDC47-202ENST00000403162 TNRC18O15417 2968 aaPredicted RBP19.18■□□□□ 0.66
CCDC47-202ENST00000403162 SERTM1A2A2V5 107 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 PCDHGA12O60330 932 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 LRATO95237 230 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 AMD1P17707 334 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 ENGP17813 658 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 EPHB3P54753 998 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 RPP38P78345 283 aaKnown RBP19.18■□□□□ 0.66
CCDC47-202ENST00000403162 CHRNA6Q15825 494 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 AHSA2Q719I0 299 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 PTOV1Q86YD1 416 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 L3MBTL4Q8NA19 623 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 KREMEN2Q8NCW0 462 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 APIPQ96GX9 242 aa19.18■□□□□ 0.66
CCDC47-202ENST00000403162 EGLN2Q96KS0 407 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms