RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SLC6A17Q9H1V8 727 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 IKZF5Q9H5V7 419 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FANCEQ9HB96 536 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 DCAF13Q9NV06 445 aaKnown RBP15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 BLOC1S6Q9UL45 172 aa15.42■□□□□ 0.06
CHRFAM7A-203ENST00000401522 hCG_2014768A0A024R1R8 64 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 A0A096LPI6 279 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 A0A1W2PPW3 197 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 GNGT2O14610 69 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 BCKDHAP12694 445 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ADRB3P13945 408 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 UGT1A1P22309 533 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 UGT1A4P22310 534 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CRHBPP24387 322 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 GSTM2P28161 218 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 UGT1A3P35503 534 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 UGT1A5P35504 534 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 POLR2IP36954 125 aaKnown RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 P2RY2P41231 377 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CNTN1Q12860 1018 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TOP3AQ13472 1001 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SUSD1Q6UWL2 747 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 USP30Q70CQ3 517 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 USP45Q70EL2 814 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CALHM3Q86XJ0 350 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CAMKK1Q8N5S9 505 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KRTCAP2Q8N6L1 136 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TSTD1Q8NFU3 115 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MIPOL1Q8TD10 442 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RAB7BQ96AH8 199 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KCNH6Q9H252 994 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 KAT8Q9H7Z6 458 aaKnown RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MAN2B2Q9Y2E5 1009 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 MAGED1Q9Y5V3 778 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 EIF3FO00303 357 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PRKD3O94806 890 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ANXA5P08758 320 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CXCL12P48061 93 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TPD52P55327 224 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SFSWAPQ12872 951 aaKnown RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TMED1Q13445 227 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 C16orf72Q14CZ0 275 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PLA2G4EQ3MJ16 856 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 LRIF1Q5T3J3 769 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PIP5KL1Q5T9C9 394 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CHST15Q7LFX5 561 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 BMP8AQ7Z5Y6 402 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CACUL1Q86Y37 369 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 EID3Q8N140 333 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ZCCHC7Q8N3Z6 543 aaKnown RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 HDDC3Q8N4P3 179 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 OR5K1Q8NHB7 308 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TBC1D15Q8TC07 691 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 HMGB4Q8WW32 186 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 BORCS5Q969J3 196 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CPPED1Q9BRF8 314 aaPredicted RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PAIP1Q9H074 479 aaKnown RBP15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RMND5AQ9H871 391 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PCDH12Q9NPG4 1184 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TBC1D23Q9NUY8 699 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TBCCD1Q9NVR7 557 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FBXL12Q9NXK8 326 aa15.41■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ZNF106Q9H2Y7 1883 aaKnown RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 A0A1W2PP55 124 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 AGAP14A8MT82 685 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 AREL1O15033 823 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CREG1O75629 220 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RECQL5O94762 991 aaPredicted RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ACADMP11310 421 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 PRPS2P11908 318 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CCNA2P20248 432 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NSG1P42857 185 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CCR3P51677 355 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 CLDN8P56748 225 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ARHGEF7Q14155 803 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ZNF829Q3KNS6 432 aaPredicted RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FGD3Q5JSP0 725 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 AGBL4Q5VU57 503 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ERAP2Q6P179 960 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 DNAJC14Q6Y2X3 702 aaPredicted RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 LRRC70Q7Z2Q7 622 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 R3HCC1LQ7Z5L2 792 aaKnown RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TCAIMQ8N3R3 496 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TMEM132CQ8N3T6 1108 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 RAB2BQ8WUD1 216 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NCLNQ969V3 563 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ITCHQ96J02 903 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 TBCDQ9BTW9 1192 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NAA50Q9GZZ1 169 aaKnown RBP15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ADNPQ9H2P0 1102 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SLC32A1Q9H598 525 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SMURF2Q9HAU4 748 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 ITM2CQ9NQX7 267 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 SERGEFQ9UGK8 458 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 FZD4Q9ULV1 537 aa15.4■□□□□ 0.06
CHRFAM7A-203ENST00000401522 NPIPB15A6NHN6 443 aaPredicted RBP15.39■□□□□ 0.05
CHRFAM7A-203ENST00000401522 PLK4O00444 970 aa15.39■□□□□ 0.05
CHRFAM7A-203ENST00000401522 B4GAT1O43505 415 aa15.39■□□□□ 0.05
CHRFAM7A-203ENST00000401522 APBB3O95704 486 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms