RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 SLC27A1Q6PCB7 646 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CREB3L2Q70SY1 520 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 NPWQ8N729 165 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 UFD1Q92890 307 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF300Q96RE9 604 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CYP2S1Q96SQ9 504 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLX1AQ9BQ83 275 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 DPH2Q9BQC3 489 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MCMBPQ9BTE3 642 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 DPAGT1Q9H3H5 408 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 PHF11Q9UIL8 331 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 UTS2RQ9UKP6 389 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SARDHQ9UL12 918 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 POFUT2Q9Y2G5 429 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 MAP4K5Q9Y4K4 846 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 GNB5O14775 395 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 EPORP19235 508 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CPN2P22792 545 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 HNMTP50135 292 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 RAB8AP61006 207 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 GALNT2Q10471 571 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 GALNT1Q10472 559 aaPredicted RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 TOMM5Q8N4H5 51 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 DNASE1L2Q92874 299 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SMARCD1Q96GM5 515 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 SLC9A7Q96T83 725 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 CCM2Q9BSQ5 444 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 ERVMER34-1Q9H9K5 563 aa9.05□□□□□ -0.96
COL28A1-201ENST00000399429 RPL36Q9Y3U8 105 aaKnown RBP9.05□□□□□ -0.96
COL28A1-201ENST00000399429 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 FXYD6-FXYD2A0A087WZ82 144 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SEPT4O43236 478 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SCO2O43819 266 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 PTHP01270 115 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 DGKAP23743 735 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 GPC1P35052 558 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 STAT5AP42229 794 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 PSMD8P48556 350 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CXCR4P61073 352 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CDONQ4KMG0 1287 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 RFTN2Q52LD8 501 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-201ENST00000399429 IFI44LQ53G44 452 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CIR1Q86X95 450 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-201ENST00000399429 DENND1CQ8IV53 801 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ZBTB44Q8NCP5 570 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 EEF1AKMT1Q8WVE0 214 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 KIAA1191Q96A73 305 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 QRFPRQ96P65 431 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 NIFKQ9BYG3 293 aaKnown RBP9.04□□□□□ -0.96
COL28A1-201ENST00000399429 FXYD6Q9H0Q3 95 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 EXTL2Q9UBQ6 330 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SLIT2O94813 1529 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ANKDD1BA6NHY2 528 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 FXYD1O00168 92 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 TLR4O00206 839 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CAPN5O15484 640 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-201ENST00000399429 TLX2O43763 284 aaPredicted RBP9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SLC22A5O76082 557 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 FGF1P05230 155 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 BMP1P13497 986 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 KDELR2P33947 212 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 AIF1P55008 147 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SP2Q02086 613 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 KEAP1Q14145 624 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 GPR162Q16538 588 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CPTPQ5TA50 214 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 KANK2Q63ZY3 851 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SLC51BQ86UW2 128 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 DNAJC5GQ8N7S2 189 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 TCEANCQ8N8B7 351 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ZFP41Q8N8Y5 198 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 AQP11Q8NBQ7 271 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CHST13Q8NET6 341 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 OR4A15Q8NGL6 344 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ZFAND1Q8TCF1 268 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 GANCQ8TET4 914 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SLC5A11Q8WWX8 675 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 SENP8Q96LD8 212 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 MBOAT4Q96T53 435 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 PKP4Q99569 1192 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 MND1Q9BWT6 205 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 NFKBIZQ9BYH8 718 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 GALNT9Q9HCQ5 603 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 PARP4Q9UKK3 1724 aaKnown RBP9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CDK2AP1O14519 115 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ANKRD28O15084 1053 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ARSDP51689 593 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 TBX4P57082 545 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 CBLBQ13191 982 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ATP13A5Q4VNC0 1218 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 ZNF484Q5JVG2 852 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 C9orf57Q5W0N0 161 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 USP51Q70EK9 711 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 TAC4Q86UU9 113 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 C3orf58Q8NDZ4 430 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 PROKR1Q8TCW9 393 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 AKT1S1Q96B36 256 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 PYCR2Q96C36 320 aa9.04□□□□□ -0.96
COL28A1-201ENST00000399429 C12orf42Q96LP6 360 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms