RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 RELAQ04206 551 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CATSPEREQ5SY80 951 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 YOD1Q5VVQ6 348 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 COX15Q7KZN9 410 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 VN1R4Q7Z5H5 301 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 THOC6Q86W42 341 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ADAMTS17Q8TE56 1095 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 APOBEC4Q8WW27 367 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NEIL2Q969S2 332 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CABS1Q96KC9 395 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 HAUS8Q9BT25 410 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FUT8Q9BYC5 575 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 L2HGDHQ9H9P8 463 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MAN2B2Q9Y2E5 1009 aa13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PTRH2Q9Y3E5 179 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CCDC88CQ9P219 2028 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 DNAJB5O75953 348 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FAM153BP0C7A2 387 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 BCL6P41182 706 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 IRF9Q00978 393 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CHAF1BQ13112 559 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MUM1Q2TAK8 710 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FAM153CQ494X1 144 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SHISA6Q6ZSJ9 500 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GPSM1Q86YR5 675 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GSPT2Q8IYD1 628 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ARHGEF39Q8N4T4 335 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ZNF740Q8NDX6 193 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ABHD11Q8NFV4 315 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ESAMQ96AP7 390 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RHBDF1Q96CC6 855 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 C17orf62Q9BQA9 187 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 DHRS4Q9BTZ2 278 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SPNS1Q9H2V7 528 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PADI2Q9Y2J8 665 aa13.43□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCNE1BA0A087WTH5 132 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TAPBPO15533 448 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ALDOAP04075 364 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 C2P06681 752 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TFEBP19484 476 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CRABP2P29373 138 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 HNMTP50135 292 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CSRP3P50461 194 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ATP6V0D1P61421 351 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RPS15AP62244 130 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CPZQ66K79 652 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OVCH1Q7RTY7 1134 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TBC1D1Q86TI0 1168 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ISCA2Q86U28 154 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ZNF843Q8N446 348 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OR4K1Q8NGD4 311 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OR2Y1Q8NGV0 311 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KCTD4Q8WVF5 259 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC44A1Q8WWI5 657 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC5A11Q8WWX8 675 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 EXT2Q93063 718 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 KIAA1191Q96A73 305 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NXNL1Q96CM4 212 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PAFAH2Q99487 392 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TRIM55Q9BYV6 548 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ALG9Q9H6U8 611 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ZNF304Q9HCX3 659 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SNX15Q9NRS6 342 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 IGSF5Q9NSI5 407 aa13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MRPS2Q9Y399 296 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ARGFXA6NJG6 315 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 POC1B-GALNT4F8VUJ3 575 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FFAR3O14843 346 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GPR42O15529 346 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FOXS1O43638 330 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 WDR47O94967 919 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ONECUT2O95948 504 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 UMODP07911 640 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 INHBAP08476 426 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MYBL2P10244 700 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 OTX2P32243 289 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GRK3P35626 688 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 FOLR3P41439 243 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SLC6A12P48065 614 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CCR8P51685 355 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 NKG7Q16617 165 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CENPLQ8N0S6 344 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 THAP4Q8WY91 577 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 COL26A1Q96A83 441 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 MOCOSQ96EN8 888 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SPSB2Q99619 263 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TMEM79Q9BSE2 394 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SOX17Q9H6I2 414 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 GEMIN8Q9NWZ8 242 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 CD274Q9NZQ7 290 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 RNF112Q9ULX5 631 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 ACOT9Q9Y305 439 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 PCSK5Q92824 1860 aa13.41□□□□□ -0.26
HLA-DQB1-202ENST00000399079 SPENQ96T58 3664 aaKnown RBP13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 A0A0A6YYC8 382 aaPredicted RBP13.4□□□□□ -0.26
HLA-DQB1-202ENST00000399079 I3L1I5 382 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms