RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 TCRBV5S1A1TA0A578 114 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 CCDC182A6NF36 153 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 TPST2O60704 377 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 BPIP17213 487 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 GANABQ14697 944 aaKnown RBP13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 ABHD13Q7L211 337 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 CTPS2Q9NRF8 586 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 IL17CQ9P0M4 197 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 MAN2B2Q9Y2E5 1009 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 POFUT2Q9Y2G5 429 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 PCDHGA4Q9Y5G9 962 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 SPO11Q9Y5K1 396 aa13.8□□□□□ -0.2
PCDHGA11-201ENST00000398587 EIF3FO00303 357 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 RFPL2O75678 378 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 OR5F1O95221 314 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 BMPR1AP36894 532 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 AVPR1BP47901 424 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SPINT3P49223 89 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 GRM2Q14416 872 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 QPRTQ15274 297 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 DHCR24Q15392 516 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 ZSWIM7Q19AV6 140 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 IQCCQ4KMZ1 466 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 HACD2Q6Y1H2 254 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 AVL9Q8NBF6 648 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 GPR150Q8NGU9 434 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 GSDMCQ9BYG8 508 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 GPN3Q9UHW5 284 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 COQ6Q9Y2Z9 468 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 PRKAB1Q9Y478 270 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 UBXN7O94888 489 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 C9P02748 559 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 C8BP07358 591 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 BCKDHAP12694 445 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 CD70P32970 193 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 IGFALSP35858 605 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 CRB2Q5IJ48 1285 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 ATG9BQ674R7 924 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 CWF19L1Q69YN2 538 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 FAAH2Q6GMR7 532 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 MINDY1Q8N5J2 469 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 PRR11Q96HE9 360 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 UTS2RQ9UKP6 389 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 RPL36Q9Y3U8 105 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 TSC22D2O75157 780 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 PENKP01210 267 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 TNFP01375 233 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 JUNP05412 331 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 H1F0P07305 194 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 C1GALT1C1LP0DN25 315 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 TFPIP10646 304 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SUOXP51687 545 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 BLOC1S3Q6QNY0 202 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 ASRGL1Q7L266 308 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SLC15A3Q8IY34 581 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 FAM46DQ8NEK8 389 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 FUBP1Q96AE4 644 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 REEP4Q9H6H4 257 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SFXN1Q9H9B4 322 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 PHF11Q9UIL8 331 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 PTBP2Q9UKA9 531 aaKnown RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SPATA2Q9UM82 520 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 VEGFDO43915 354 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 CNPY1Q3B7I2 92 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 NADK2Q4G0N4 442 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 KLHL22Q53GT1 634 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 ZNF789Q5FWF6 425 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SLC8B1Q6J4K2 584 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 JAZF1Q86VZ6 243 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 TMEM25Q86YD3 366 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 OR52B6Q8NGF0 335 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 C9orf43Q8TAL5 461 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 KAT2AQ92830 837 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 SMARCD2Q92925 531 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 C5orf34Q96MH7 638 aa13.79□□□□□ -0.2
PCDHGA11-201ENST00000398587 A0A096LPI6 279 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 PSMD11O00231 422 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 XKRYO14609 159 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 PAK4O96013 591 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 BCHEP06276 602 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 HTR1EP28566 365 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 SRP54P61011 504 aaKnown RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 SH3BP2P78314 561 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 ZBED5Q49AG3 693 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 C12orf76Q8N812 135 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 OR4C6Q8NH72 309 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 HSH2DQ96JZ2 352 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 CASD1Q96PB1 797 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 YIPF4Q9BSR8 244 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 AMBNQ9NP70 447 aa13.78□□□□□ -0.2
PCDHGA11-201ENST00000398587 IGSF5Q9NSI5 407 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms