RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CACNG1Q06432 222 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 STX4Q12846 297 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SP140Q13342 867 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 HKDC1Q2TB90 917 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PIK3R6Q5UE93 754 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TMEM207Q6UWW9 146 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DEF8Q6ZN54 512 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DNAJB7Q7Z6W7 309 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SPARTQ8N0X7 666 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 L3MBTL4Q8NA19 623 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RHOXF1Q8NHV9 184 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MOCOSQ96EN8 888 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PANX1Q96RD7 426 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TRPC4Q9UBN4 977 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FAM25EA8MYX2 175 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ADM5C9JUS6 153 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TNFRSF11BO00300 401 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 HDCP19113 662 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MATN1P21941 496 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CLCNKBP51801 687 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TSTQ16762 297 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 AGAP7PQ5VUJ5 663 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CXorf57Q6NSI4 855 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 LDB1Q86U70 411 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DCAF4L2Q8NA75 395 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PLD4Q96BZ4 506 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FAM126AQ9BYI3 521 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 LHPPQ9H008 270 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 KRCC1Q9NPI7 259 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ENPP5Q9UJA9 477 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CPQQ9Y646 472 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 INSIG1O15503 277 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 GOT2P00505 430 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MMP2P08253 660 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CLTBP09497 229 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PFKLP17858 780 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RFX3P48380 749 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DSC2Q02487 901 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 LAPTM4AQ15012 233 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PLEKHG6Q3KR16 790 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CCDC36Q8IYA8 594 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 C7orf57Q8NEG2 295 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DENND6BQ8NEG7 585 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZFP90Q8TF47 636 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ATL1Q8WXF7 558 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FRMD6Q96NE9 622 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TMEM74Q96NL1 305 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ERMAPQ96PL5 475 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SMURF2Q9HAU4 748 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MAT2BQ9NZL9 334 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 STUB1Q9UNE7 303 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CCL27Q9Y4X3 112 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TIMM13Q9Y5L4 95 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ANKRD66B4E2M5 251 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 FUCA1P04066 466 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 ITGB1P05556 798 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 PRPS1L1P21108 318 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 ALDH9A1P49189 494 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 NUDT6P53370 316 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 KCNC3Q14003 757 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TEAD4Q15561 434 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 SETMARQ53H47 684 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 LRRC70Q7Z2Q7 622 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 LRRTM3Q86VH5 581 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TIGD4Q8IY51 512 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 SELENOMQ8WWX9 145 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 MUL1Q969V5 352 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF764Q96H86 408 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 ITCHQ96J02 903 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 SEPT5Q99719 369 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 BARD1Q99728 777 aaKnown RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 C2orf49Q9BVC5 232 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 PADI3Q9ULW8 664 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TESMINQ9Y4I5 508 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 KLK4Q9Y5K2 254 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 LOC100130705A0A1B0GUX0 176 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 SMIM30A4D0T7 59 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 H7C4K7 107 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 RFXANKO14593 260 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TLR5O60602 858 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 PSMA1P25786 263 aaKnown RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 PBLDP30039 288 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 OR4D2P58180 307 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 RNF219Q5W0B1 726 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 CPZQ66K79 652 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 GLT6D1Q7Z4J2 308 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 MMAAQ8IVH4 418 aaKnown RBP5.29□□□□□ -1.56
PTPRD-205ENST00000397611 CADM2Q8N3J6 435 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TRIB2Q92519 343 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 SLC38A4Q969I6 547 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TIFAQ96CG3 184 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF285Q96NJ3 590 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 CENPOQ9BU64 300 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 P2RY12Q9H244 342 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 DSN1Q9H410 356 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 TIGARQ9NQ88 270 aa5.29□□□□□ -1.56
PTPRD-205ENST00000397611 STARD7Q9NQZ5 370 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms