RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CDK6Q00534 326 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 OR4D1Q15615 310 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 GPR33Q49SQ1 333 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 LIN54Q6MZP7 749 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PSAPL1Q6NUJ1 521 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PSRC1Q6PGN9 363 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 CYS1Q717R9 158 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 IFNLR1Q8IU57 520 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 NFKBIDQ8NI38 313 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 IPCEF1Q8WWN9 437 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PIK3R3Q92569 461 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 RAB8BQ92930 207 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 RERGQ96A58 199 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 IMP4Q96G21 291 aaKnown RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 CHIAQ9BZP6 476 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ZDHHC3Q9NYG2 299 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 COMMD9Q9P000 198 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 TMEM9Q9P0T7 183 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 DENRO43583 198 aaKnown RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PRAMEF11O60813 436 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 GPR32O75388 356 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PREPP48147 710 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 GJA8P48165 433 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 XKP51811 444 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 MEF2AQ02078 507 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 GRB14Q14449 540 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 RFTN1Q14699 578 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SUSD1Q6UWL2 747 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 RTL4Q6ZR62 310 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ISCA2Q86U28 154 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ADGRG2Q8IZP9 1017 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ZNF655Q8N720 491 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ZBTB8BQ8NAP8 495 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SNX33Q8WV41 574 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SCAMP4Q969E2 229 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ITPAQ9BY32 194 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ZNF224Q9NZL3 707 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 EMCNQ9ULC0 261 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 RNF6Q9Y252 685 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SLC27A6Q9Y2P4 619 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 VIPP01282 170 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 BCHEP06276 602 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 KCNA5P22460 613 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 CPN2P22792 545 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 BCAP31P51572 246 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SLC13A2Q13183 592 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 PMS2P3Q13401 168 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 UGT2A3Q6UWM9 527 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 Q6ZVL8 140 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 CYP4V2Q6ZWL3 525 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 NPAS4Q8IUM7 802 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 AQP11Q8NBQ7 271 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 TRPV1Q8NER1 839 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 OR10T2Q8NGX3 314 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 CYB5D2Q8WUJ1 264 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 KATNBL1Q9H079 304 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ZNF696Q9H7X3 374 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 NFKBIL1Q9UBC1 381 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-204ENST00000397545 MKL2Q9ULH7 1088 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 SCN1AP35498 2009 aa10.45□□□□□ -0.74
CCDC40-204ENST00000397545 ZNF487B1APH4 448 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 CCRL2O00421 344 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 MT-ND2P03891 347 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 FCER2P06734 321 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 C8AP07357 584 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 GNAO1P09471 354 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 ARSAP15289 507 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 CCND3P30281 292 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 BDKRB1P46663 353 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 C18orf21Q32NC0 220 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 FAM171BQ6P995 826 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 SYCE2Q6PIF2 218 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 AGMOQ6ZNB7 445 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 ARMCX6Q7L4S7 300 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 HMGN2P46Q86SG4 172 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 FNDC8Q8TC99 324 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 ZNF599Q96NL3 588 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 SLC2A13Q96QE2 648 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 DPH2Q9BQC3 489 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 BEX2Q9BXY8 128 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 GSDMCQ9BYG8 508 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 ELAC1Q9H777 363 aaKnown RBP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 SCML2Q9UQR0 700 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 DHRS7Q9Y394 339 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 PAPSS2O95340 614 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 GJB5O95377 273 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 EOMESO95936 686 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 RORCP51449 518 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 CSTF1Q05048 431 aaKnown RBP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 DUOXA1Q1HG43 343 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 GTDC1Q4AE62 458 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 ARSIQ5FYB1 569 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 LRRC66Q68CR7 880 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 TICAM1Q8IUC6 712 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 HS3ST5Q8IZT8 346 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 KCNJ9Q92806 393 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 KHSRPQ92945 711 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC40-204ENST00000397545 ACDQ96AP0 544 aa10.44□□□□□ -0.74
CCDC40-204ENST00000397545 PLD4Q96BZ4 506 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms