RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MYOFQ9NZM1 2061 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 MANSC4A6NHS7 340 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 METTL15A6NJ78 407 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DRGXA6NNA5 263 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 WASH4PA8MWX3 477 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SLC1A7O00341 560 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 AXIN1O15169 862 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 GSTA4O15217 222 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TBL1XO60907 577 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SEC22BO75396 215 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SLC25A14O95258 325 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 HPRP00739 348 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 IFNA16P05015 189 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 UROSP10746 265 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SLC11A2P49281 568 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 FCGRTP55899 365 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PRKG2Q13237 762 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 GPR50Q13585 617 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RCAN2Q14206 197 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 POM121L1PQ3SYA9 428 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SPATS1Q496A3 300 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SPANXN2Q5MJ10 180 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 NXNL2Q5VZ03 156 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 AFTPHQ6ULP2 937 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RFLNAQ6ZTI6 216 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 BEND5Q7L4P6 421 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DGLUCYQ7Z3D6 616 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 GALNT5Q7Z7M9 940 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ADGRG2Q8IZP9 1017 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 MINDY1Q8N5J2 469 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PAPD5Q8NDF8 572 aaKnown RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 ST13P5Q8NFI4 369 aaPredicted RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 OR56A4Q8NGH8 313 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 RHEBL1Q8TAI7 183 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ITFG1Q8TB96 612 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DEDD2Q8WXF8 326 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 HERVK_113Q902F9 699 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TMCO6Q96DC7 493 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 TOE1Q96GM8 510 aaKnown RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 FUBP3Q96I24 572 aaKnown RBP eCLIP4.88□□□□□ -1.632e-8■■□□□ 13.8
SSR1-202ENST00000397511 NSMCE2Q96MF7 247 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 FERD3LQ96RJ6 166 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ROGDIQ9GZN7 287 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SMG9Q9H0W8 520 aaKnown RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 TOR3AQ9H497 397 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SERHL2Q9H4I8 314 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 CARS2Q9HA77 564 aaKnown RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 STARD7Q9NQZ5 370 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 SLC6A13Q9NSD5 602 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 ABCD2Q9UBJ2 740 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 EIF3KQ9UBQ5 218 aaKnown RBP4.88□□□□□ -1.63
SSR1-202ENST00000397511 LIMD1Q9UGP4 676 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 INVSQ9Y283 1065 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 A3GALT2U3KPV4 340 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 DOCK6Q96HP0 2047 aa4.88□□□□□ -1.63
SSR1-202ENST00000397511 PLD2O14939 933 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FFAR2O15552 330 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SGTAO43765 313 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 PQBP1O60828 265 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 STC2O76061 302 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 RPS17P08708 135 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 CBLP22681 906 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 HTR7P34969 479 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 KRT20P35900 424 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MLLT3P42568 568 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 MTHFRP42898 656 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SLC15A1P46059 708 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 RPS5P46782 204 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ZFP36L2P47974 494 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 YBEYP58557 167 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 FKBP1BP68106 108 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ZXDBP98169 803 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NFKB2Q00653 900 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 GTF2H2Q13888 395 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 COL9A2Q14055 689 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 DGCR6Q14129 220 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TAF1AQ15573 450 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 TCTN1Q2MV58 587 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FAM214AQ32MH5 1076 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 GPAT3Q53EU6 434 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SPANXN4Q5MJ08 99 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TXNDC8Q6A555 127 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 GTF2H2CQ6P1K8 395 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SPESP1Q6UW49 350 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CREB3L2Q70SY1 520 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 EFL1Q7Z2Z2 1120 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 GOLGA7Q7Z5G4 137 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 RNF180Q86T96 592 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TSPAN33Q86UF1 283 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SERPINA9Q86WD7 417 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MICU2Q8IYU8 434 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CHPFQ8IZ52 775 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 APCDD1Q8J025 514 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NLGN4XQ8N0W4 816 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 C10orf111Q8N326 155 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TMEM199Q8N511 208 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SETD6Q8TBK2 473 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MCOLN3Q8TDD5 553 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SLC7A6Q92536 515 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms