RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RPS15AP62244 130 aaKnown RBP20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 CXADRP78310 365 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 MEF2AQ02078 507 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 MZB1Q8WU39 189 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 CHST8Q9H2A9 424 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 CUTCQ9NTM9 273 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 DNAJC11Q9NVH1 559 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 ASB1Q9Y576 335 aa20.25■□□□□ 0.83
TSPAN4-206ENST00000397408 FEZF1A0PJY2 475 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 CCNT2O60583 730 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 NUDT17P0C025 328 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 ATXN8OSP0DMR3 200 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 GFAPP14136 432 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 TCN2P20062 427 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 F8A1P23610 371 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 BCL6P41182 706 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 ARSFP54793 590 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 CDC16Q13042 620 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 DNASE1L3Q13609 305 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 PRTGQ2VWP7 1150 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 ZNF385CQ66K41 422 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 LCN10Q6JVE6 187 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 ZNF517Q6ZMY9 492 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 TTLL10Q6ZVT0 673 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 TDRPQ86YL5 185 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 CNPY4Q8N129 248 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 OR2W6PQ8NHA6 318 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 PROKR1Q8TCW9 393 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 GBP5Q96PP8 586 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 EFHD1Q9BUP0 239 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 PELI2Q9HAT8 420 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 CPSF2Q9P2I0 782 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 XPR1Q9UBH6 696 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 NDOR1Q9UHB4 597 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 IL17BQ9UHF5 180 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 PCDHGA4Q9Y5G9 962 aa20.24■□□□□ 0.83
TSPAN4-206ENST00000397408 A0A1B0GX78 115 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 GOLGA8RI6L899 631 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 K7ENP7 123 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 TERTO14746 1132 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 P2RX6O15547 441 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 STATHP02808 62 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 TUBBP07437 444 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 RBP1P09455 135 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 GNAZP19086 355 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 AGXTP21549 392 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 ALAS2P22557 587 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 AGTR2P50052 363 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 VAC14Q08AM6 782 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 HKDC1Q2TB90 917 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 ARHGAP40Q5TG30 622 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 YOD1Q5VVQ6 348 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 INO80CQ6PI98 192 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 NXPE4Q6UWF7 544 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 LRRC70Q7Z2Q7 622 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 SNX31Q8N9S9 440 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 OR4K1Q8NGD4 311 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 UBTD2Q8WUN7 234 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 RUFY1Q96T51 708 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 DPH2Q9BQC3 489 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 CD244Q9BZW8 370 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 SPNS1Q9H2V7 528 aa20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 RUVBL1Q9Y265 456 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 MRPS18BQ9Y676 258 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-206ENST00000397408 HYKKA2RU49 373 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 C21orf140B9A014 251 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 MAP2K7O14733 419 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 DSCR3O14972 297 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 CDH16O75309 829 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 KATNA1O75449 491 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 REEP5Q00765 189 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 PDK4Q16654 411 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 PFKFB4Q16877 469 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 FAM214AQ32MH5 1076 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 FAM198BQ6UWH4 519 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 VN1R4Q7Z5H5 301 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 MREGQ8N565 214 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 ZNF740Q8NDX6 193 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 ACMSDQ8TDX5 336 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 STARD8Q92502 1023 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 THAP11Q96EK4 314 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 SLC45A3Q96JT2 553 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 C10orf90Q96M02 699 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 GPRC5BQ9NZH0 403 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 KCND3Q9UK17 655 aa20.22■□□□□ 0.83
TSPAN4-206ENST00000397408 ITPR1Q14643 2758 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 KCNE1BA0A087WTH5 132 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 TRBC2A0A5B9 178 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 TK2O00142 265 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 LCMT2O60294 686 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 MED26O95402 600 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 PYGBP11216 843 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 KRT15P19012 456 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 VARSP26640 1264 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 IFFO1Q0D2I5 559 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 SLC9A5Q14940 896 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 SETDB1Q15047 1291 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 RASA2Q15283 850 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 CYP4X1Q8N118 509 aa20.21■□□□□ 0.83
TSPAN4-206ENST00000397408 DTWD1Q8N5C7 304 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms