RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ZNF670-ZNF695F2Z2N8 137 aa7□□□□□ -1.29
UPF2-203ENST00000397053 M0R2N6 131 aa7□□□□□ -1.29
UPF2-203ENST00000397053 AXIN1O15169 862 aa7□□□□□ -1.29
UPF2-203ENST00000397053 PRAMEF10O60809 474 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RAD51DO75771 328 aa7□□□□□ -1.29
UPF2-203ENST00000397053 P04436 131 aa7□□□□□ -1.29
UPF2-203ENST00000397053 GPIP06744 558 aa7□□□□□ -1.29
UPF2-203ENST00000397053 PFKLP17858 780 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SHMT2P34897 504 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ARL2P36404 184 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RABGGTBP53611 331 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SF3B4Q15427 424 aaKnown RBP eCLIP7□□□□□ -1.291e-6■■■□□ 19.1
UPF2-203ENST00000397053 SLC10A6Q3KNW5 377 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RBM48Q5RL73 367 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 KIAA0930Q6ICG6 404 aaPredicted RBP7□□□□□ -1.29
UPF2-203ENST00000397053 FBXL22Q6P050 247 aa7□□□□□ -1.29
UPF2-203ENST00000397053 LYSMD3Q7Z3D4 306 aa7□□□□□ -1.29
UPF2-203ENST00000397053 TMCO2Q7Z6W1 182 aaPredicted RBP7□□□□□ -1.29
UPF2-203ENST00000397053 ZC3HC1Q86WB0 502 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 DCUN1D3Q8IWE4 304 aa7□□□□□ -1.29
UPF2-203ENST00000397053 KLHL36Q8N4N3 616 aa7□□□□□ -1.29
UPF2-203ENST00000397053 OR13C4Q8NGS5 318 aa7□□□□□ -1.29
UPF2-203ENST00000397053 DAZLQ92904 295 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 FBXL18Q96ME1 805 aa7□□□□□ -1.29
UPF2-203ENST00000397053 KREMEN1Q96MU8 473 aa7□□□□□ -1.29
UPF2-203ENST00000397053 FEM1AQ9BSK4 669 aa7□□□□□ -1.29
UPF2-203ENST00000397053 GIN1Q9NXP7 522 aa7□□□□□ -1.29
UPF2-203ENST00000397053 EIF3KQ9UBQ5 218 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 GRHPRQ9UBQ7 328 aa7□□□□□ -1.29
UPF2-203ENST00000397053 MALT1Q9UDY8 824 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ACAD8Q9UKU7 415 aa7□□□□□ -1.29
UPF2-203ENST00000397053 POFUT2Q9Y2G5 429 aa7□□□□□ -1.29
UPF2-203ENST00000397053 INSL5Q9Y5Q6 135 aa7□□□□□ -1.29
UPF2-203ENST00000397053 KNL1Q8NG31 2342 aa7□□□□□ -1.29
UPF2-203ENST00000397053 FAM237AA0A1B0GTK4 181 aa7□□□□□ -1.29
UPF2-203ENST00000397053 PLOD2O00469 737 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RNF13O43567 381 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ORC5O43913 435 aa7□□□□□ -1.29
UPF2-203ENST00000397053 NIPSNAP2O75323 286 aa7□□□□□ -1.29
UPF2-203ENST00000397053 CCNKO75909 580 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ARL6IP5O75915 188 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ITGB1P05556 798 aa7□□□□□ -1.29
UPF2-203ENST00000397053 JUNDP17535 347 aa7□□□□□ -1.29
UPF2-203ENST00000397053 GSTM3P21266 225 aa7□□□□□ -1.29
UPF2-203ENST00000397053 GNG2P59768 71 aa7□□□□□ -1.29
UPF2-203ENST00000397053 EMC10Q5UCC4 262 aa7□□□□□ -1.29
UPF2-203ENST00000397053 FRG2Q64ET8 278 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ZYG11AQ6WRX3 759 aa7□□□□□ -1.29
UPF2-203ENST00000397053 TPRG1Q6ZUI0 275 aa7□□□□□ -1.29
UPF2-203ENST00000397053 MREGQ8N565 214 aa7□□□□□ -1.29
UPF2-203ENST00000397053 OR5AK3PQ8NH89 298 aa7□□□□□ -1.29
UPF2-203ENST00000397053 AENQ8WTP8 325 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 AKAP1Q92667 903 aaKnown RBP eCLIP7□□□□□ -1.29
UPF2-203ENST00000397053 KLHL15Q96M94 604 aa7□□□□□ -1.29
UPF2-203ENST00000397053 WDR92Q96MX6 357 aa7□□□□□ -1.29
UPF2-203ENST00000397053 FRG2BQ96QU4 278 aa7□□□□□ -1.29
UPF2-203ENST00000397053 OR2M4Q96R27 311 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ORAI3Q9BRQ5 295 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SLC35A5Q9BS91 424 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RBCK1Q9BYM8 510 aa7□□□□□ -1.29
UPF2-203ENST00000397053 MAF1Q9H063 256 aa7□□□□□ -1.29
UPF2-203ENST00000397053 PAK6Q9NQU5 681 aaPredicted RBP7□□□□□ -1.29
UPF2-203ENST00000397053 FLRT1Q9NZU1 646 aa7□□□□□ -1.29
UPF2-203ENST00000397053 TNFRSF10DQ9UBN6 386 aa7□□□□□ -1.29
UPF2-203ENST00000397053 KCNS2Q9ULS6 477 aa7□□□□□ -1.29
UPF2-203ENST00000397053 CNTN6Q9UQ52 1028 aa7□□□□□ -1.29
UPF2-203ENST00000397053 WDR45Q9Y484 360 aa7□□□□□ -1.29
UPF2-203ENST00000397053 KNTC1P50748 2209 aa7□□□□□ -1.29
UPF2-203ENST00000397053 A0A1W2PPL8 197 aa7□□□□□ -1.29
UPF2-203ENST00000397053 C2orf74A8MZ97 194 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SEC14L5O43304 696 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ABCB7O75027 752 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RAB36O95755 333 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SRPRAP08240 638 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 CFHP08603 1231 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ATP1B2P14415 290 aaPredicted RBP7□□□□□ -1.29
UPF2-203ENST00000397053 HK1P19367 917 aa7□□□□□ -1.29
UPF2-203ENST00000397053 GSTM2P28161 218 aa7□□□□□ -1.29
UPF2-203ENST00000397053 GNRHRP30968 328 aa7□□□□□ -1.29
UPF2-203ENST00000397053 PTDSS1P48651 473 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 LBX1P52954 281 aa7□□□□□ -1.29
UPF2-203ENST00000397053 AP2S1P53680 142 aaPredicted RBP7□□□□□ -1.29
UPF2-203ENST00000397053 OR4D2P58180 307 aa7□□□□□ -1.29
UPF2-203ENST00000397053 CLRN1P58418 232 aa7□□□□□ -1.29
UPF2-203ENST00000397053 DCDC1P59894 354 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ID2Q02363 134 aa7□□□□□ -1.29
UPF2-203ENST00000397053 CBLBQ13191 982 aa7□□□□□ -1.29
UPF2-203ENST00000397053 PMS2P3Q13401 168 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RBM39Q14498 530 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 DSC3Q14574 896 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ODF4Q2M2E3 257 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ZFP69Q49AA0 526 aa7□□□□□ -1.29
UPF2-203ENST00000397053 TMEM35AQ53FP2 167 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SLC2A7Q6PXP3 512 aa7□□□□□ -1.29
UPF2-203ENST00000397053 ZNF852Q6ZMS4 543 aa7□□□□□ -1.29
UPF2-203ENST00000397053 SLITRK4Q8IW52 837 aa7□□□□□ -1.29
UPF2-203ENST00000397053 TSEN2Q8NCE0 465 aaKnown RBP7□□□□□ -1.29
UPF2-203ENST00000397053 OR9K2Q8NGE7 335 aa7□□□□□ -1.29
UPF2-203ENST00000397053 RHBDD1Q8TEB9 315 aa7□□□□□ -1.29
UPF2-203ENST00000397053 OTUB2Q96DC9 234 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms