RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PRAMEF1O95521 474 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 NAT1P18440 290 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 AQP1P29972 269 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 RFX2P48378 723 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 YIF1BQ5BJH7 314 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 RSPO2Q6UXX9 243 aaPredicted RBP23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 SKA2Q8WVK7 121 aaPredicted RBP23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 RNF170Q96K19 258 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 TTPALQ9BTX7 342 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 MEIOCA2RUB1 952 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 HMX3A6NHT5 357 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 KIAA0513O60268 411 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 ZNF623O75123 536 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 FKBP9O95302 570 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 ESR1P03372 595 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 CYP2A7P20853 494 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 LIMK1P53667 647 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 MAD2L1Q13257 205 aaPredicted RBP23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 IRF3Q14653 427 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 SF1Q15637 639 aaKnown RBP23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 ARMC4Q5T2S8 1044 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 NOXA1Q86UR1 476 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 SERPINA9Q86WD7 417 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 HRASLS5Q96KN8 279 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 KCNC2Q96PR1 638 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 TRNT1Q96Q11 434 aaKnown RBP23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 DHRS7Q9Y394 339 aa23.24■■□□□ 1.31
CSNK1E-203ENST00000396832 LINC00854A0A1B0GVQ3 168 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 GLTPD2A6NH11 291 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 CLCA1A8K7I4 914 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 AGRPO00253 132 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TFECO14948 347 aaPredicted RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 STSP08842 583 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 NUDT6P53370 316 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 SLAMF1Q13291 335 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TP53BP2Q13625 1128 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 NFE2Q16621 373 aaPredicted RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 RNF219Q5W0B1 726 aaPredicted RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 USP50Q70EL3 339 aaPredicted RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TMEM132CQ8N3T6 1108 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 DNAJC22Q8N4W6 341 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 C8orf48Q96LL4 319 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 ACPTQ9BZG2 426 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 SERHLQ9NQF3 203 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 THUMPD1Q9NXG2 353 aaKnown RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 GPR83Q9NYM4 423 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 SPASTQ9UBP0 616 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 VPS9D1Q9Y2B5 631 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TNPO3Q9Y5L0 923 aaKnown RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 VWA8A3KMH1 1905 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 PTHP01270 115 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 ADORA3P0DMS8 318 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 CR2P20023 1033 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TNFSF8P32971 234 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 PTGER3P43115 390 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 CASP9P55211 416 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 ABHD18Q0P651 414 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 CLLU1OSQ5K130 101 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 OR4F3Q6IEY1 312 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TRAF7Q6Q0C0 670 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TPD52L3Q96J77 140 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 REEP1Q9H902 201 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 RANGRFQ9HD47 186 aaPredicted RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 LOC105371267A0A1B0GV96 52 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 WNT9AO14904 365 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 UGT2B17O75795 530 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 SLITRK5O94991 958 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 YES1P07947 543 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 ITGA2P17301 1181 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 FBXO43Q4G163 708 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 ARMC12Q5T9G4 340 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 FAHD1Q6P587 224 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 SETD6Q8TBK2 473 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 FYTTD1Q96QD9 318 aaKnown RBP23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 KCNH6Q9H252 994 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 TNKS2Q9H2K2 1166 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 PCDHGB2Q9Y5G2 931 aa23.23■■□□□ 1.31
CSNK1E-203ENST00000396832 ZSCAN5BA6NJL1 495 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 PDYNP01213 254 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 RRM2P31350 389 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 S100A3P33764 101 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 HNF4AP41235 474 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 GPLD1P80108 840 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 GLB1LQ6UWU2 654 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 ADGRG2Q8IZP9 1017 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 ADGRE3Q9BY15 652 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 GPR62Q9BZJ7 368 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 P2RY12Q9H244 342 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 PPT2Q9UMR5 302 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 TRAPPC4Q9Y296 219 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 K7ERQ8 282 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 MANBAO00462 879 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 IGLV3-27P01718 113 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 KRT6AP02538 564 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 KRT6BP04259 564 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 TIE1P35590 1138 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 C19orf57Q0VDD7 668 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 LRIF1Q5T3J3 769 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 ELMOD2Q8IZ81 293 aa23.22■■□□□ 1.31
CSNK1E-203ENST00000396832 FLCNQ8NFG4 579 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms