RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CES3Q6UWW8 571 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 WASH2PQ6VEQ5 465 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 LYSMD2Q8IV50 215 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ADGRG5Q8IZF4 528 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ZBTB2Q8N680 514 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DENND6BQ8NEG7 585 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 OR56A4Q8NGH8 313 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 BPIFB1Q8TDL5 484 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 BTN2A2Q8WVV5 523 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RASSF5Q8WWW0 418 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TESCQ96BS2 214 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 RSPRY1Q96DX4 576 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 MOCOSQ96EN8 888 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 PPP1R16AQ96I34 528 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TMEM74Q96NL1 305 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 YIPF4Q9BSR8 244 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 TEX101Q9BY14 249 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 CD244Q9BZW8 370 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ATXN3LQ9H3M9 355 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 WASH6PQ9NQA3 447 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 UBP1Q9NZI7 540 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NPAP1Q9NZP6 1156 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ADGRE2Q9UHX3 823 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 FKBPLQ9UIM3 349 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 ZNF229Q9UJW7 825 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 IKZF3Q9UKT9 509 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 FZD4Q9ULV1 537 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 NDUFAF1Q9Y375 327 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 KCTD3Q9Y597 815 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 DNAJC15Q9Y5T4 150 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 HCFC2Q9Y5Z7 792 aa5.2□□□□□ -1.58
VPS41-203ENST00000395969 A0A1W2PRQ8 180 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FAM149AA5PLN7 773 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 H0YIV9 168 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 CBX4O00257 560 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FOXE1O00358 373 aaPredicted RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 OR7A17O14581 309 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SNPHO15079 494 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 RAD51BO15315 384 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 KLF4O43474 513 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 NDUFS3O75489 264 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GJB3O75712 270 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 UPK1BO75841 260 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PRSS23O95084 383 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 MFN2O95140 757 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 KRT6AP02538 564 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FTH1P02794 183 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 KRT6BP04259 564 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 CTSLP07711 333 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FCGR1AP12314 374 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 EPORP19235 508 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ITIH1P19827 911 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 M6PRP20645 277 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 IL10P22301 178 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SHMT2P34897 504 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TRIM23P36406 574 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 OPRD1P41143 372 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 RGS4P49798 205 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GNG2P59768 71 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 STX1BP61266 288 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ERVK-8P63133 956 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TUBA1BP68363 451 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 MLC1Q15049 377 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS41-203ENST00000395969 LRIF1Q5T3J3 769 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ANKS6Q68DC2 871 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 GPR153Q6NV75 609 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 BLOC1S3Q6QNY0 202 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 USP30Q70CQ3 517 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TUBA1AQ71U36 451 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 MTSS1LQ765P7 747 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SPATC1Q76KD6 591 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TMEM25Q86YD3 366 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 DDIASQ8IXT1 998 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ZCCHC7Q8N3Z6 543 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 ESX1Q8N693 406 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ASCC1Q8N9N2 400 aaKnown RBP5.19□□□□□ -1.58
VPS41-203ENST00000395969 GPR26Q8NDV2 337 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SIMC1Q8NDZ2 872 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TRPV3Q8NET8 790 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 RHOXF1Q8NHV9 184 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ZFPM2Q8WW38 1151 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TTC9Q92623 222 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 HTRA1Q92743 480 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 C19orf60Q96EN9 201 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ZFYVE19Q96K21 471 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 LRRC3BQ96PB8 259 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 FAM129BQ96TA1 746 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SLC25A23Q9BV35 468 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SGPP1Q9BX95 441 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PCED1AQ9H1Q7 454 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 TUBB1Q9H4B7 451 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 BRD9Q9H8M2 597 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 NECTIN3Q9NQS3 549 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 ITM2CQ9NQX7 267 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 HCN2Q9UL51 889 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 SATB2Q9UPW6 733 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 CCL26Q9Y258 94 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 PCDHGA10Q9Y5H3 936 aa5.19□□□□□ -1.58
VPS41-203ENST00000395969 COL5A1P20908 1838 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms