RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CCSMST1Q4G0I0 132 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 FRG2Q64ET8 278 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 AMZ2Q86W34 360 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 SLC15A3Q8IY34 581 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 WDR34Q96EX3 536 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 METTL2AQ96IZ6 378 aaKnown RBP14.58□□□□□ -0.07
SCAF11-204ENST00000395454 FRG2BQ96QU4 278 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 OR4K3Q96R72 315 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 TACO1Q9BSH4 297 aaKnown RBP14.58□□□□□ -0.07
SCAF11-204ENST00000395454 OR52A5Q9H2C5 316 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 PSMD13Q9UNM6 376 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 TMED5Q9Y3A6 229 aa14.58□□□□□ -0.07
SCAF11-204ENST00000395454 OTOGLQ3ZCN5 2332 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 C15orf38-AP3S2A0A0A6YYH1 394 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 KRT87PA6NCN2 255 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 H0YIV9 168 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 CAPNS1P04632 268 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 SYPP08247 313 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 VARSP26640 1264 aaKnown RBP14.58□□□□□ -0.08
SCAF11-204ENST00000395454 BDKRB1P46663 353 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ARRB1P49407 418 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-204ENST00000395454 SESN3P58005 492 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 HMGCS1Q01581 520 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 PAGE3Q5JUK9 113 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 PLA2G2CQ5R387 149 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 GRHL2Q6ISB3 625 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ARPINQ7Z6K5 226 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 CFAP206Q8IYR0 622 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 FAM9CQ8IZT9 166 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 RNF148Q8N7C7 305 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 BHLHE22Q8NFJ8 381 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-204ENST00000395454 CCL4L1Q8NHW4 92 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 WDR20Q8TBZ3 569 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 VPS33AQ96AX1 596 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 SLC45A3Q96JT2 553 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ZNF570Q96NI8 536 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ELF4Q99607 663 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-204ENST00000395454 SLC39A3Q9BRY0 314 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 GTPBP2Q9BX10 602 aaKnown RBP14.58□□□□□ -0.08
SCAF11-204ENST00000395454 SGPP1Q9BX95 441 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ATG10Q9H0Y0 220 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 OSGEPL1Q9H4B0 414 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ELOVL6Q9H5J4 265 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 ERVMER34-1Q9H9K5 563 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 C6orf203Q9P0P8 240 aaPredicted RBP14.58□□□□□ -0.08
SCAF11-204ENST00000395454 SLC23A2Q9UGH3 650 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 KCNK6Q9Y257 313 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 PLEKHM1Q9Y4G2 1056 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 PCM1Q15154 2024 aa14.58□□□□□ -0.08
SCAF11-204ENST00000395454 EP300Q09472 2414 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-204ENST00000395454 PRSS51A0A1B0GVH4 220 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 TCRBV3S1A0A5B6 114 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 C9JVG2 144 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 ARHGAP33O14559 1287 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 SDC3O75056 442 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 HSD3B1P14060 373 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 SLC2A4P14672 509 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 ACADSP16219 412 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CD22P20273 847 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 HSD3B2P26439 372 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 HNF4AP41235 474 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 HNRNPKP61978 463 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CTBSQ01459 385 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 BNIP2Q12982 314 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CSTF3Q12996 717 aaKnown RBP14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CHIT1Q13231 466 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 C1orf61Q13536 156 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 NFE2L1Q14494 772 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 HLA-BQ31612 363 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 PDZD3Q86UT5 571 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 LRRC56Q8IYG6 542 aaPredicted RBP14.57□□□□□ -0.08
SCAF11-204ENST00000395454 GOLM1Q8NBJ4 401 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 SELENOMQ8WWX9 145 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 DNAJC9Q8WXX5 260 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 TMEM125Q96AQ2 219 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CMTM7Q96FZ5 175 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CLMPQ9H6B4 373 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 GAREM1Q9H706 876 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 TRNAU1APQ9NX07 287 aaKnown RBP14.57□□□□□ -0.08
SCAF11-204ENST00000395454 CMTM6Q9NX76 183 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 NCDNQ9UBB6 729 aa14.57□□□□□ -0.08
SCAF11-204ENST00000395454 ATP6V1C1P21283 382 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 AK4P27144 223 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-204ENST00000395454 ATXN3P54252 364 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-204ENST00000395454 SPEM2Q0P670 501 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 ILF3Q12906 894 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCAF11-204ENST00000395454 IMPG1Q17R60 797 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 TIGD2Q4W5G0 525 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 C10orf62Q5T681 223 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-204ENST00000395454 CACHD1Q5VU97 1274 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 SLC30A9Q6PML9 568 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 DLEU7Q6UYE1 221 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 PTRH1Q86Y79 214 aaKnown RBP14.56□□□□□ -0.08
SCAF11-204ENST00000395454 KIAA2013Q8IYS2 634 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 FAM156AQ8NDB6 213 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 ZNF480Q8WV37 535 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 ZUFSPQ96AP4 578 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 C11orf24Q96F05 449 aaPredicted RBP14.56□□□□□ -0.08
SCAF11-204ENST00000395454 TIMM29Q9BSF4 260 aa14.56□□□□□ -0.08
SCAF11-204ENST00000395454 LRRC61Q9BV99 259 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms