RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 OPN1SWP03999 348 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 KIR3DL1P43629 444 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 NCS1P62166 190 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 IFITM3Q01628 133 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 MVKQ03426 396 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 NPTX1Q15818 432 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PIK3C3Q8NEB9 887 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 MED8Q96G25 268 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 HSH2DQ96JZ2 352 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SH3GL1Q99961 368 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 GPN2Q9H9Y4 310 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PNMA8BQ9ULN7 279 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 M0R129 80 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 FKBP9O95302 570 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ABCB1P08183 1280 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 OCM2P0CE71 109 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 OCMP0CE72 109 aaPredicted RBP13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ETV3P41162 512 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 BDKRB1P46663 353 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ABHD18Q0P651 414 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ARHGAP15Q53QZ3 475 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM215Q68D42 235 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 OR2T5Q6IEZ7 315 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 FAM180BQ6P0A1 224 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF852Q6ZMS4 543 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 FKBP9P1Q75LS8 142 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 DDHD1Q8NEL9 900 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 OR2T29Q8NH02 315 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 ELMO1Q92556 727 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 CMTM7Q96FZ5 175 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SPHK2Q9NRA0 654 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SELENONQ9NZV5 590 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SNX6Q9UNH7 406 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 COQ6Q9Y2Z9 468 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 SNX5Q9Y5X3 404 aa13.04□□□□□ -0.32
GTF2F1-201ENST00000394456 VIPP01282 170 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 COX7A2P14406 83 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 MAGEA2P43356 314 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 SPINT3P49223 89 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 CTSCP53634 463 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 GAB1Q13480 694 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 CAMK1Q14012 370 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 XKR6Q5GH73 641 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 EGFLAMQ63HQ2 1017 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 SHQ1Q6PI26 577 aaKnown RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 METTL3Q86U44 580 aaKnown RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 CBARPQ8N350 705 aaPredicted RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 COX4I2Q96KJ9 171 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 OR4K3Q96R72 315 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 DNAJC11Q9NVH1 559 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 EYSQ5T1H1 3165 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 ZNF99A8MXY4 864 aaPredicted RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 SLC16A6O15403 523 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 LCKP06239 509 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 HIST1H2AGP0C0S8 130 aaPredicted RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 HIST1H2ADP20671 130 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 PSMB9P28065 219 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 PBLDP30039 288 aaPredicted RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 EPHA5P54756 1037 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 IRF8Q02556 426 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 DOC2AQ14183 400 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 VMACQ2NL98 169 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 HKDC1Q2TB90 917 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 IER5LQ5T953 404 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 USP45Q70EL2 814 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 TSEN54Q7Z6J9 526 aaKnown RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 ADIPOR2Q86V24 386 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 L3MBTL4Q8NA19 623 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 ECHDC3Q96DC8 303 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 NRBF2Q96F24 287 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 HIST1H2AHQ96KK5 128 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 CNDP2Q96KP4 475 aaKnown RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 RDH12Q96NR8 316 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 NRTNQ99748 197 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 HIST1H2AJQ99878 128 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 H2AFJQ9BTM1 129 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 MAGIXQ9H6Y5 334 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 RMND5AQ9H871 391 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 IL1RAPQ9NPH3 570 aa13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 SAMHD1Q9Y3Z3 626 aaKnown RBP13.03□□□□□ -0.32
GTF2F1-201ENST00000394456 FUOMA2VDF0 154 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 LINC01553A4QN01 128 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 FADS2P1A8MWK0 482 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 MAGEB17A8MXT2 336 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 TMEM229AB2RXF0 380 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 CFAP99D6REC4 459 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 SAP18O00422 153 aaKnown RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 RECQL5O94762 991 aaPredicted RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 OR56A5P0C7T3 313 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 ATP1B2P14415 290 aaPredicted RBP13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 CEBPBP17676 345 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 KDELR2P33947 212 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 KRT20P35900 424 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 PHEXP78562 749 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 OCA2Q04671 838 aa13.02□□□□□ -0.32
GTF2F1-201ENST00000394456 NAE1Q13564 534 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms