RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 AHSA2Q719I0 299 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 LRRC70Q7Z2Q7 622 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CHERPQ8IWX8 916 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 SLC39A11Q8N1S5 342 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 ZNF557Q8N988 423 aaPredicted RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 OR4K1Q8NGD4 311 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CXorf40AQ8TE69 158 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 TFAP2CQ92754 450 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 IRF7Q92985 503 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 APIPQ96GX9 242 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 NAA50Q9GZZ1 169 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 DUS2Q9NX74 493 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 DEC1Q9P2X7 70 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 CNOT11Q9UKZ1 510 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 RUVBL1Q9Y265 456 aaKnown RBP10.22□□□□□ -0.77
CALD1-203ENST00000393118 MGAMO43451 1857 aa10.22□□□□□ -0.77
CALD1-203ENST00000393118 A0A0G2JN53 185 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 HLA-FP30511 346 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 SUOXP51687 545 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 DGKEP52429 567 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 GRM2Q14416 872 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 COQ5Q5HYK3 327 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 LHX8Q68G74 356 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 GAREM2Q75VX8 874 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 VASH1Q7L8A9 365 aaPredicted RBP10.21□□□□□ -0.77
CALD1-203ENST00000393118 R3HCC1LQ7Z5L2 792 aaKnown RBP10.21□□□□□ -0.77
CALD1-203ENST00000393118 TCEAL8Q8IYN2 117 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 LMNTD1Q8N9Z9 388 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 SLC46A2Q9BY10 475 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 ANKRD60Q9BZ19 345 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 IL37Q9NZH6 218 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 ERGIC3Q9Y282 383 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 DLGAP4Q9Y2H0 992 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 PCDHB14Q9Y5E9 798 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 PCDHGA11Q9Y5H2 935 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 CENPFP49454 3210 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 DNAH12Q6ZR08 3092 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 SGTAO43765 313 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 XPNPEP2O43895 674 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 ATP6V1E1P36543 226 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 SPINT3P49223 89 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 HNMTP50135 292 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 MED27Q6P2C8 311 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 GOLM1Q8NBJ4 401 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 SMG7Q92540 1137 aaKnown RBP10.21□□□□□ -0.77
CALD1-203ENST00000393118 MCMBPQ9BTE3 642 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 SLC29A3Q9BZD2 475 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 OR51B5Q9H339 312 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 RETREG1Q9H6L5 497 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 CAPN10Q9HC96 672 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 AHSPQ9NZD4 102 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 PCDHA9Q9Y5H5 950 aa10.21□□□□□ -0.77
CALD1-203ENST00000393118 ZNF646O15015 1829 aaPredicted RBP10.21□□□□□ -0.77
CALD1-203ENST00000393118 FXYD1O00168 92 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 WBP4O75554 376 aaKnown RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 NPPAP01160 153 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 AP1S2P56377 157 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 SRSF11Q05519 484 aaKnown RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 EIF4EBP2Q13542 120 aaPredicted RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 RFX4Q33E94 735 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 CYP27C1Q4G0S4 372 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 BRAT1Q6PJG6 821 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 SLC39A5Q6ZMH5 540 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 CHPFQ8IZ52 775 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 OR5K1Q8NHB7 308 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 FIBINQ8TAL6 211 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 LRRC20Q8TCA0 184 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 TCEAL4Q96EI5 215 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 ELOVL2Q9NXB9 296 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 TRPS1Q9UHF7 1281 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 OTOFQ9HC10 1997 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 H3BMQ9 156 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 TMX2-CTNND1H3BSU7 103 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 WNT9AO14904 365 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 PCDH7O60245 1069 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 IFNA14P01570 189 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 EPHX1P07099 455 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 PMS2P3Q13401 168 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 KRR1Q13601 381 aaKnown RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 SLBPQ14493 270 aaKnown RBP eCLIP10.21□□□□□ -0.78
CALD1-203ENST00000393118 SPANXN2Q5MJ10 180 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 ATAD3BQ5T9A4 648 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 MMAAQ8IVH4 418 aaKnown RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 ASCC1Q8N9N2 400 aaKnown RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 TTC29Q8NA56 475 aaPredicted RBP10.21□□□□□ -0.78
CALD1-203ENST00000393118 OR8J3Q8NGG0 315 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 OR8D1Q8WZ84 308 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 DPF3Q92784 378 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 KLK6Q92876 244 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 FOXJ1Q92949 421 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 ZHX1-C8orf76Q96EF9 292 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 COG8Q96MW5 612 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 FZD4Q9ULV1 537 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 CCL26Q9Y258 94 aa10.21□□□□□ -0.78
CALD1-203ENST00000393118 WDR90Q96KV7 1748 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 GNRH1P01148 92 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 GSTM1P09488 218 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 CBSLP0DN79 551 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms