RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CCDC160A6NGH7 325 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 G3V2T6 193 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 CPSF4O95639 269 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ALBP02768 609 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ACADLP28330 430 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ALDH3B2P48448 385 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 PNLIPRP1P54315 467 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 SLBPQ14493 270 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ZIK1Q3SY52 487 aaPredicted RBP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 SPIN4Q56A73 249 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 C11orf96Q7Z7L8 435 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 LRRC56Q8IYG6 542 aaPredicted RBP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 CLEC4FQ8N1N0 589 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 STARD8Q92502 1023 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 WDR34Q96EX3 536 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 DPEP2Q9H4A9 486 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 THAP10Q9P2Z0 257 aaPredicted RBP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 CDH23Q9H251 3354 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 H0YAE9 185 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 IL1RNP18510 177 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ASMTP46597 345 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 TAP2Q03519 686 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 HKDC1Q2TB90 917 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 CES5AQ6NT32 575 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 BORAQ6PGQ7 559 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ABRAXAS1Q6UWZ7 409 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ZFAND2BQ8WV99 257 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 SH3KBP1Q96B97 665 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 REPS1Q96D71 796 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 DUSP26Q9BV47 211 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ZDHHC5Q9C0B5 715 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 ITM2CQ9NQX7 267 aa24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 YBX2Q9Y2T7 364 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 KIF26AQ9ULI4 1882 aaPredicted RBP24.69■■□□□ 1.54
SMARCD3-203ENST00000392811 MGAT4DA6NG13 374 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 GABRR3A8MPY1 467 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 EPN2O95208 641 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 C1GALT1C1LP0DN25 315 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 EFNA1P20827 205 aaPredicted RBP24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 GJA4P35212 333 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 ZCCHC8Q6NZY4 707 aaKnown RBP24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 FKBP9P1Q75LS8 142 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 CPA6Q8N4T0 437 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 PYURFQ96I23 114 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 AASDHPPTQ9NRN7 309 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 TRIM64A6NGJ6 449 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 GNGT2O14610 69 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 BMP10O95393 424 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 HPRP00739 348 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 THRBP10828 461 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 TIA1P31483 386 aaKnown RBP eCLIP24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 RUNX3Q13761 415 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 PIP5KL1Q5T9C9 394 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 EGFLAMQ63HQ2 1017 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 OR10Q1Q8NGQ4 319 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 RAB7BQ96AH8 199 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 SDCCAG3Q96C92 435 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 COX14Q96I36 57 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 EFCAB11Q9BUY7 163 aa24.68■■□□□ 1.54
SMARCD3-203ENST00000392811 C5orf42Q9H799 3197 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 PCM1Q15154 2024 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 GPX2P18283 190 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 ROR2Q01974 943 aaKnown RBP24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 CPTPQ5TA50 214 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 GPR155Q7Z3F1 870 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 ZZZ3Q8IYH5 903 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 HS3ST5Q8IZT8 346 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 POP5Q969H6 163 aaKnown RBP24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 TMIGD2Q96BF3 282 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 OR52A5Q9H2C5 316 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 SMURF2Q9HAU4 748 aa24.67■■□□□ 1.54
SMARCD3-203ENST00000392811 GNG14A0A1W2PPG7 69 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 PIPSLA2A3N6 862 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 TRIM64CA6NLI5 447 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 PCDH7O60245 1069 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 CCNDBP1O95273 360 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 KCNK5O95279 499 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 VAC14Q08AM6 782 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 PLCL1Q15111 1095 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 ADAMTSL4Q6UY14 1074 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 LAS2Q8IYD9 372 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 ZCCHC7Q8N3Z6 543 aaKnown RBP24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 SVOPLQ8N434 492 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 SLC5A11Q8WWX8 675 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 CCDC177Q9NQR7 707 aaPredicted RBP24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 TUBA8Q9NY65 449 aaPredicted RBP24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 CEPT1Q9Y6K0 416 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 A0A087WXM4 84 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 H3BSA7 217 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 KAT7O95251 611 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 IDSP22304 550 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 HPCAL1P37235 193 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 FCHO2Q0JRZ9 810 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 VMACQ2NL98 169 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 PAGE2BQ5JRK9 111 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 UNC5DQ6UXZ4 953 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 CAMKMTQ7Z624 323 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 HEATR4Q86WZ0 1026 aa24.66■■□□□ 1.54
SMARCD3-203ENST00000392811 CACUL1Q86Y37 369 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms