RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PTPRRQ15256 657 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 RABL3Q5HYI8 236 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 RDH10Q8IZV5 341 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 NETO2Q8NC67 525 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CHAC2Q8WUX2 184 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 GSKIPQ9P0R6 139 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CMAHPQ9Y471 501 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 MAFO75444 373 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 GJB1P08034 283 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CD3GP09693 182 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 INHBEP58166 350 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 ACTA2P62736 377 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 ACTG2P63267 376 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SCARB2Q14108 478 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 LIX1LQ8IVB5 337 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 FAM84AQ96KN4 292 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 DGAT2Q96PD7 388 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CYP2S1Q96SQ9 504 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 SSX3Q99909 188 aa14.37□□□□□ -0.11
CCDC50-201ENST00000392455 MRPL45Q9BRJ2 306 aaKnown RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF334Q9HCZ1 680 aaPredicted RBP14.37□□□□□ -0.11
CCDC50-201ENST00000392455 CCL16O15467 120 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 LATO43561 262 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 GAD2Q05329 585 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 PLEKHG7Q6ZR37 379 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 TMED4Q7Z7H5 227 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 TEX51A0A1B0GUA7 166 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 TLR5O60602 858 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CD36P16671 472 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 DRD4P21917 467 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 SMAD3P84022 425 aaKnown RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 NPTX1Q15818 432 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 FAM71AQ8IYT1 594 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CHCHD4Q8N4Q1 142 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 LCN9Q8WX39 176 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MRI1Q9BV20 369 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF16P17020 682 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CCNHP51946 323 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 KIF25Q9UIL4 384 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 TMEM14AQ9Y6G1 99 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 S1PR1P21453 382 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 GTF2BQ00403 316 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CCDC58Q4VC31 144 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MFSD5Q6N075 450 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ALDH16A1Q8IZ83 802 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ZNF619Q8N2I2 560 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 AUTS2Q8WXX7 1259 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 RGMAQ96B86 450 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 FLRT1Q9NZU1 646 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 OTOL1A6NHN0 477 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 GABRR2P28476 465 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MRPS5P82675 430 aaKnown RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 RPA4Q13156 261 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CNPY1Q3B7I2 92 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 RAB39BQ96DA2 213 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MECRQ9BV79 373 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 HERC2P3Q9BVR0 1158 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MAF1Q9H063 256 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 TUBG2Q9NRH3 451 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 FETUBQ9UGM5 382 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 YDJCA8MPS7 323 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 BPGMP07738 259 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ACTBP60709 375 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ACTG1P63261 375 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 EEF1A2Q05639 463 aaKnown RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CAPSQ13938 189 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MEDAGQ5VYS4 303 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ZBTB8BQ8NAP8 495 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 LPGAT1Q92604 370 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ART4Q93070 314 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 RIPOR3Q96MK2 946 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 YIPF4Q9BSR8 244 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 MRM3Q9HC36 420 aaKnown RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 ERVK-19Q9WJR5 959 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 A0A1W2PQH9 124 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 IRF6O14896 467 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 PRPH2P23942 346 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 TMPPEQ6ZT21 453 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 CREB3L2Q70SY1 520 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 GALNT12Q8IXK2 581 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 GPR151Q8TDV0 419 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 AURKBQ96GD4 344 aaPredicted RBP14.36□□□□□ -0.11
CCDC50-201ENST00000392455 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 WDR18Q9BV38 432 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 KCND1Q9NSA2 647 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 AP1M2Q9Y6Q5 423 aa14.36□□□□□ -0.11
CCDC50-201ENST00000392455 PAGE1O75459 146 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 KCNC1P48547 511 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 CDH12P55289 794 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 C1QTNF8P60827 252 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 ERVK-21P61565 698 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 SLC25A52Q3SY17 297 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 SLC36A3Q495N2 470 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 TMEM234Q8WY98 164 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 RSC1A1Q92681 617 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 HCN2Q9UL51 889 aa14.35□□□□□ -0.11
CCDC50-201ENST00000392455 UBFD1O14562 309 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms