RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PRAP1Q96NZ9 151 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 OR2A5Q96R48 311 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 OR4K3Q96R72 315 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 CTRCQ99895 268 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 C17orf62Q9BQA9 187 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 DPH2Q9BQC3 489 aaPredicted RBP6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SELENOSQ9BQE4 189 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 AIF1LQ9BQI0 150 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 EFHD1Q9BUP0 239 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NLNQ9BYT8 704 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ULBP3Q9BZM4 244 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SLC7A5P2Q9GIP4 190 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 KLHL25Q9H0H3 589 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 NT5DC2Q9H857 520 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PELI2Q9HAT8 420 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 APMAPQ9HDC9 416 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SLC6A20Q9NP91 592 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ABCF3Q9NUQ8 709 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PCMTD2Q9NV79 361 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 DNAJC11Q9NVH1 559 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ZNF358Q9NW07 568 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 TMEM216Q9P0N5 145 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 XPR1Q9UBH6 696 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 OPTCQ9UBM4 332 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 PADI1Q9ULC6 663 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SRPK3Q9UPE1 567 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 SEC16AO15027 2179 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 ANKRD12Q6UB98 2062 aa6.48□□□□□ -1.37
UBBP1-201ENST00000392399 LAMA5O15230 3695 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ZZEF1O43149 2961 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 DSPP15924 2871 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 A0A087WV48 116 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 A0A0J9YVX5 310 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TRBC2A0A5B9 178 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 SMIM23A6NLE4 172 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 AGRPO00253 132 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 RGS16O15492 202 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ZSCAN9O15535 394 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ZNF749O43361 778 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CCNT2O60583 730 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 UGDHO60701 494 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CTSVO60911 334 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 KIAA0754O94854 1291 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 DLGAP3O95886 979 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 MYZAPP0CAP1 466 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 C1GALT1C1LP0DN25 315 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 PIM1P11309 404 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CDH1P12830 882 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ATP5F1P24539 256 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 HPDP32754 393 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 AHRP35869 848 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 GMPRP36959 345 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 EIF2S3P41091 472 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 GDF5P43026 501 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 HSPA7P48741 367 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 YBX1P67809 324 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 NFKB2Q00653 900 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ABHD18Q0P651 414 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 GPS2Q13227 327 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 LAPTM5Q13571 262 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 E2F2Q14209 437 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TBCCQ15814 346 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 PDK4Q16654 411 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 HIST2H2ACQ16777 129 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 KRT71Q3SY84 523 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 PAGE2BQ5JRK9 111 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 WASHC2DQ5SRD0 308 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ATG9BQ674R7 924 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 HIST2H2AA3Q6FI13 130 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 RHBDD2Q6NTF9 364 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 NIPAL1Q6NVV3 410 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 LRRC69Q6ZNQ3 347 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 SLCO4C1Q6ZQN7 724 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TRABD2AQ86V40 505 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TMEM126BQ8IUX1 230 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 SLC22A9Q8IVM8 553 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 HOMEZQ8IX15 550 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 NLGN4XQ8N0W4 816 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 KRT78Q8N1N4 520 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TMEM151AQ8N4L1 468 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TTC29Q8NA56 475 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 CAMKVQ8NCB2 501 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TRPV3Q8NET8 790 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 NLGN4YQ8NFZ3 816 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 RDH11Q8TC12 318 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 PROKR1Q8TCW9 393 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 KCNE4Q8WWG9 221 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ZCCHC14Q8WYQ9 949 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 EXT2Q93063 718 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 UBE2E3Q969T4 207 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TM4SF19Q96DZ7 209 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 WDR34Q96EX3 536 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 MVB12AQ96EY5 273 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 PTCD3Q96EY7 689 aaKnown RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 PGM2Q96G03 612 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 MAGEB10Q96LZ2 347 aaPredicted RBP6.47□□□□□ -1.37
UBBP1-201ENST00000392399 ZIM3Q96PE6 472 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 SMC6Q96SB8 1091 aa6.47□□□□□ -1.37
UBBP1-201ENST00000392399 TMEM79Q9BSE2 394 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms