RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 MED22Q15528 200 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 GSG1Q2KHT4 349 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ASTE1Q2TB18 679 aaPredicted RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 GKAP1Q5VSY0 366 aaPredicted RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ZNF691Q5VV52 312 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 LDHAL6AQ6ZMR3 332 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ABI3BPQ7Z7G0 1075 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ARMC8Q8IUR7 673 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 FBXO16Q8IX29 292 aaPredicted RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 LGI2Q8N0V4 545 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 CHURC1Q8WUH1 139 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 SSMEM1Q8WWF3 244 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 MOAP1Q96BY2 351 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 MAGEB18Q96M61 343 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 OLFM1Q99784 485 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ISCA1Q9BUE6 129 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 PAXXQ9BUH6 204 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 EGLN3Q9H6Z9 239 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 TBC1D17Q9HA65 648 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 LARSQ9P2J5 1176 aaKnown RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 POLLQ9UGP5 575 aa0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ELF5Q9UKW6 265 aaPredicted RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 ZNF346Q9UL40 294 aaKnown RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 COL5A1P20908 1838 aaPredicted RBP0.64□□□□□ -2.31
RNU6-239P-201ENST00000390990 FRMD3A2A2Y4 597 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 ANKUB1A6NFN9 424 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 ZSCAN5CA6NGD5 496 aaPredicted RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 EPOPA6NHQ4 379 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 O00370 1275 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 HS6ST1O60243 411 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 TPPPO94811 219 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 BAG3O95817 575 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 EIF2S1P05198 315 aaKnown RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 RPLP0P05388 317 aaKnown RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 HCKP08631 526 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 OR2T7P0C7T2 308 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 AXLP30530 894 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 BSGP35613 385 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 RBMXP38159 391 aaKnown RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 SLC1A4P43007 532 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 SUOXP51687 545 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 GNB2P62879 340 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 KIAA0040Q15053 153 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 MLF2Q15773 248 aaPredicted RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 TAF12Q16514 161 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 TMEM266Q2M3C6 531 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 KRT39Q6A163 491 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 KIAA0930Q6ICG6 404 aaPredicted RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 C11orf63Q6NUN7 778 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 SLC22A15Q8IZD6 547 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 RPLP0P6Q8NHW5 317 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 SRSF12Q8WXF0 261 aaKnown RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 POMGNT1Q8WZA1 660 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 PIK3R3Q92569 461 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 HDAC11Q96DB2 347 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 SGF29Q96ES7 293 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 RPS6KC1Q96S38 1066 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 STRADBQ9C0K7 418 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 PAIP1Q9H074 479 aaKnown RBP0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 ITGA11Q9UKX5 1188 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 MTMR6Q9Y217 621 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 CHKBQ9Y259 395 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 NEDD4P46934 1319 aa0.63□□□□□ -2.31
RNU6-239P-201ENST00000390990 IGLV3-16A0A075B6K0 115 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 IGKV2-28A0A075B6P5 120 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 IGKV1D-17A0A075B6S4 117 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 FAM231BA6NCW3 169 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 TMEM221A6NGB7 291 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 RNF103O00237 685 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 RTCAO00442 366 aaKnown RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 PDXKO00764 312 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 MTRF1O75570 445 aaKnown RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 IGKV2D-28P01615 120 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 IGLV1-47P01700 117 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 HAPLN1P10915 354 aaPredicted RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 PON1P27169 355 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 GDF1P27539 372 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 SLC9A3P48764 834 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 PSG7Q13046 419 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 HSP90AB2PQ58FF8 381 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 ZNF600Q6ZNG1 722 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 ARHGAP22Q7Z5H3 698 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 MCEMP1Q8IX19 187 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 RNF175Q8N4F7 328 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 TCEANCQ8N8B7 351 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 THAP8Q8NA92 274 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 OR9Q2Q8NGE9 314 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 OR10Q1Q8NGQ4 319 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 OR6F1Q8NGZ6 308 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 SNRNP27Q8WVK2 155 aaKnown RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 ARHGEF2Q92974 986 aaKnown RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 IL22RA2Q969J5 263 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 THOC1Q96FV9 657 aaKnown RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 MCCC1Q96RQ3 725 aaPredicted RBP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 PI4K2AQ9BTU6 479 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 KLK11Q9UBX7 282 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 HACL1Q9UJ83 578 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 SPATA2Q9UM82 520 aa0.62□□□□□ -2.31
RNU6-239P-201ENST00000390990 ARHGAP26Q9UNA1 814 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms