RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ATP9AO75110 1047 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC22A3O75751 556 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 GLCEO94923 617 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 FRMD6-AS1P0C7T7 363 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 PRKAR1AP10644 381 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 GP1BBP13224 206 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 CASP3P42574 277 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 DNA2P51530 1060 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 LBX1P52954 281 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 NME5P56597 212 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 GCNT1Q02742 428 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 AP1B1Q10567 949 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 RPA4Q13156 261 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 MAPK11Q15759 364 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 GTDC1Q4AE62 458 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 IFI44LQ53G44 452 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 FGD3Q5JSP0 725 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 UGT3A1Q6NUS8 523 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 PODNL1Q6PEZ8 512 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 PRSS55Q6UWB4 352 aaPredicted RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 MARK2Q7KZI7 788 aaKnown RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC16A9Q7RTY1 509 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 PIGZQ86VD9 579 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 CCDC60Q8IWA6 550 aaPredicted RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 RCOR2Q8IZ40 523 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 CIARTQ8N365 385 aaPredicted RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 ARL10Q8N8L6 244 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 OR10V1Q8NGI7 309 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 FCAMRQ8WWV6 532 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 CCDC47Q96A33 483 aaKnown RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 NDNQ99608 321 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 NAPBQ9H115 298 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 C10orf88Q9H8K7 445 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 SIX2Q9NPC8 291 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 PHPT1Q9NRX4 125 aaPredicted RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 SPG21Q9NZD8 308 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 AGTPBP1Q9UPW5 1226 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 HBS1LQ9Y450 684 aaKnown RBP4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 COLEC10Q9Y6Z7 277 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 HEG1Q9ULI3 1381 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 SCN5AQ14524 2016 aa4.89□□□□□ -1.63
RNU6-40P-201ENST00000384254 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 SMIM30A4D0T7 59 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 C2CD4DB7Z1M9 353 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 E5RGE8 158 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM72CH0Y354 149 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC22A2O15244 555 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 KINO60870 393 aaKnown RBP4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 CDK2AP2O75956 126 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 DDHD2O94830 711 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 CLPTM1O96005 669 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 SBK2P0C263 348 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 F3P13726 295 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 STMN1P16949 149 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 MAGEA11P43364 429 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 OR3A3P47888 321 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 DLX5P56178 289 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 CLDN17P56750 224 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 KIAA1024LP59773 190 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 ARHGAP1Q07960 439 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 ABRQ12979 859 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 SGCGQ13326 291 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 ACKR1Q16570 336 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 KIAA1644Q3SXP7 199 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM72AQ5TYM5 149 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM72DQ6L9T8 149 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 IL17RELQ6ZVW7 336 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 ANKRD33Q7Z3H0 272 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 PRUNE1Q86TP1 453 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 FAM72BQ86X60 149 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 AQP12AQ8IXF9 295 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 KLHDC8AQ8IYD2 350 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 KIRREL3Q8IZU9 778 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 CHCHD4Q8N4Q1 142 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 MARVELD2Q8N4S9 558 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 SLC37A3Q8NCC5 494 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 GPRC5AQ8NFJ5 357 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 PIK3R3Q92569 461 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 GIMAP5Q96F15 307 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 INPP4AQ96PE3 977 aaPredicted RBP4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 CDCA3Q99618 268 aaPredicted RBP4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 EXOC1Q9NV70 894 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 INTS10Q9NVR2 710 aaKnown RBP4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 TMOD3Q9NYL9 352 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 ZNF624Q9P2J8 865 aaPredicted RBP4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 IL36AQ9UHA7 158 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 C2CD2Q9Y426 696 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 KLK4Q9Y5K2 254 aa4.88□□□□□ -1.63
RNU6-40P-201ENST00000384254 CACNB4O00305 520 aaPredicted RBP4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 SCO2O43819 266 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 EXTL3O43909 919 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 PCDH7O60245 1069 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 BAG3O95817 575 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 ATP1B1P05026 303 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 YES1P07947 543 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 CPA3P15088 417 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 ALDH1B1P30837 517 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 SERPINB6P35237 376 aa4.87□□□□□ -1.63
RNU6-40P-201ENST00000384254 ACTN3Q08043 901 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms