RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SIGLEC11Q96RL6 698 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 LYSMD1Q96S90 227 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ALOXE3Q9BYJ1 711 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CPEB1Q9BZB8 566 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CD274Q9NZQ7 290 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MARK1Q9P0L2 795 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 EIF2B4Q9UI10 523 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TRMT6Q9UJA5 497 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 IKZF3Q9UKT9 509 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MKLN1Q9UL63 735 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 POLR3HQ9Y535 204 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PCDHB1Q9Y5F3 818 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SCN8AQ9UQD0 1980 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 HAT1O14929 419 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TBX1O43435 398 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 RGS14O43566 566 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 NIPSNAP2O75323 286 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ERN1O75460 977 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 KCNK2O95069 426 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MED26O95402 600 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 POP4O95707 220 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 TSPAN12O95859 305 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 APOA1P02647 267 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 KRT8P05787 483 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PGRP06401 933 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PCSK2P16519 638 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CEBPBP17676 345 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PRKACGP22612 351 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MAD2L1BPQ15013 274 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 RFTN2Q52LD8 501 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CARD16Q5EG05 197 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SNX20Q7Z614 316 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ZSWIM9Q86XI8 627 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CALHM3Q86XJ0 350 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 OR52B6Q8NGF0 335 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 VOPP1Q96AW1 172 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ZSWIM3Q96MP5 696 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SNX18Q96RF0 628 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MCOLN1Q9GZU1 580 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 P2RY12Q9H244 342 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ASIC5Q9NY37 505 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 CCDC59Q9P031 241 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 OPTCQ9UBM4 332 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 SLCO3A1Q9UIG8 710 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 PPIL1Q9Y3C6 166 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 MRPS23Q9Y3D9 190 aaKnown RBP8.67□□□□□ -1.02
GPNMB-202ENST00000381990 HCFC2Q9Y5Z7 792 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 WNT6Q9Y6F9 365 aa8.67□□□□□ -1.02
GPNMB-202ENST00000381990 ANKRD12Q6UB98 2062 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 TRBV5-3A0A0A0MS03 114 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 GOLGA8CPA6NN73 597 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 GAPDHSO14556 408 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 PER2O15055 1255 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 AIREO43918 545 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 FAM20BO75063 409 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CLDN7O95471 211 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 PRAMEF1O95521 474 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 SERPINA1P01009 418 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ITGALP20701 1170 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 FSHRP23945 695 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 RCVRNP35243 200 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 FAM174BQ3ZCQ3 159 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 FBXO48Q5FWF7 155 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CACHD1Q5VU97 1274 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 KIAA1614Q5VZ46 1190 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CES5AQ6NT32 575 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 FAM151BQ6UXP7 276 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ADIPOR2Q86V24 386 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CYP4Z1Q86W10 505 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 HEATR4Q86WZ0 1026 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ADGRG2Q8IZP9 1017 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CBARPQ8N350 705 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 KBTBD8Q8NFY9 601 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 SCRN2Q96FV2 425 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 PDLIM5Q96HC4 596 aaKnown RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 TP63Q9H3D4 680 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 RIBC2Q9H4K1 309 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 EXD2Q9NVH0 621 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 C1orf109Q9NX04 203 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 UTS2RQ9UKP6 389 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 TRBV5-4A0A0C4DH59 114 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 A0A1W2PQ67 120 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ANKRD34BA5PLL1 514 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 E5RI56 91 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 BNIP3LO60238 219 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CCNDBP1O95273 360 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CA3P07451 260 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF7P17097 686 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 BPIP17213 487 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 DNAJA1P31689 397 aaKnown RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ETV6P41212 452 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CLK3P49761 638 aaKnown RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 PTPN5P54829 565 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 GPM6BQ13491 265 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 GBX1Q14549 363 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 TBCEQ15813 527 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 GPR33Q49SQ1 333 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 TPRG1LQ5T0D9 272 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms