RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 DDCP20711 480 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 IGFBP5P24593 272 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PSMD8P48556 350 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 AIF1P55008 147 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 NSUN2Q08J23 767 aaKnown RBP eCLIP5.58□□□□□ -1.52
RFC1-202ENST00000381897 TMEM95Q3KNT9 176 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PRAMEF14Q5SWL7 426 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 MRNIPQ6NTE8 343 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZNF549Q6P9A3 640 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZNF605Q86T29 641 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 SAPCD2Q86UD0 394 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 METTL4Q8N3J2 472 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 C11orf44Q8N8P7 122 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 BVESQ8NE79 360 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 IPMKQ8NFU5 416 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 CEP76Q8TAP6 659 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 RNF139Q8WU17 664 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 FAM120BQ96EK7 910 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 RBM14Q96PK6 669 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 TRNT1Q96Q11 434 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 CDK5RAP1Q96SZ6 601 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 LRRC3Q9BY71 257 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 PORCNQ9H237 461 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 NANOGQ9H9S0 305 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 KLHL28Q9NXS3 571 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 TRMT6Q9UJA5 497 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 EMCNQ9ULC0 261 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 HSF4Q9ULV5 492 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 ZNF451Q9Y4E5 1061 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 NOX1Q9Y5S8 564 aa5.58□□□□□ -1.52
RFC1-202ENST00000381897 COL14A1Q05707 1796 aaKnown RBP5.58□□□□□ -1.52
RFC1-202ENST00000381897 PTPRJQ12913 1337 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 POLRMTO00411 1230 aaKnown RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 PIGRP01833 764 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 ITGB3P05106 788 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 NR3C2P08235 984 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 SNRNP70P08621 437 aaKnown RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 HGFP14210 728 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 CD36P16671 472 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 NPR3P17342 541 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 JUNDP17535 347 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 ADORA2BP29275 332 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 MAP3K8P41279 467 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PTPN9P43378 593 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 MEOX1P50221 254 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 SCAPQ12770 1279 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 GTF2H2Q13888 395 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 C1DQ13901 141 aaKnown RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 FAM174BQ3ZCQ3 159 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 ATP13A5Q4VNC0 1218 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 GPAT3Q53EU6 434 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PRAMEF18Q5VWM3 479 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 GTF2H2CQ6P1K8 395 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PRSS55Q6UWB4 352 aaPredicted RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 C15orf39Q6ZRI6 1047 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 LRRTM4Q86VH4 590 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 CLIP4Q8N3C7 705 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 OR56A4Q8NGH8 313 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 AP3S1Q92572 193 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 MTERF3Q96E29 417 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 SDSLQ96GA7 329 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 MUS81Q96NY9 551 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 GPR22Q99680 433 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 GON7Q9BXV9 100 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 BCAS3Q9H6U6 928 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 TM9SF3Q9HD45 589 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PRMT8Q9NR22 394 aaPredicted RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 RNF146Q9NTX7 359 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PRMT7Q9NVM4 692 aaPredicted RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 FCF1Q9Y324 198 aaKnown RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 NAALAD2Q9Y3Q0 740 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 CIB4A0PJX0 185 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 ERVH48-1M5A8F1 160 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 OR6A2O95222 327 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 MLYCDO95822 493 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 TPOP07202 933 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 M6PRP20645 277 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 CASP3P42574 277 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 ARG2P78540 354 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 DUSP4Q13115 394 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 CAMK1Q14012 370 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 E2F2Q14209 437 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PGM5Q15124 567 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 NPTX1Q15818 432 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 VPS26BQ4G0F5 336 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.57□□□□□ -1.52
RFC1-202ENST00000381897 AGAP6Q5VW22 663 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 RHOUQ7L0Q8 258 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 DCP1BQ8IZD4 617 aaKnown RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 RNF149Q8NC42 400 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 OR5B17Q8NGF7 314 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PCDH19Q8TAB3 1148 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 TMBIM1Q969X1 311 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 P2RY11Q96G91 374 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 AGAP4Q96P64 663 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 SPXQ9BT56 116 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 DDX4Q9NQI0 724 aaKnown RBP5.57□□□□□ -1.52
RFC1-202ENST00000381897 SLC35D1Q9NTN3 355 aa5.57□□□□□ -1.52
RFC1-202ENST00000381897 PEMTQ9UBM1 199 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms