RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 MAGEB16A2A368 324 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 ZNF839A8K0R7 811 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 GFYI3L273 518 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 E2F3O00716 465 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 PHF2O75151 1096 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 HEXBP07686 556 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 UQCRHP07919 91 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 ANXA5P08758 320 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 PRR35P0CG20 571 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 SLC26A3P40879 764 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 TBPL1P62380 186 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 TIAL1Q01085 375 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHOX-202ENST00000381575 MFAP5Q13361 173 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 CRYMQ14894 314 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 RBM20Q5T481 1227 aaKnown RBP13.44□□□□□ -0.26
SHOX-202ENST00000381575 ZC3H7AQ8IWR0 971 aaKnown RBP13.44□□□□□ -0.26
SHOX-202ENST00000381575 KBTBD2Q8IY47 623 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHOX-202ENST00000381575 OR9A4Q8NGU2 314 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 OSBPL9Q96SU4 736 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 BARD1Q99728 777 aaKnown RBP13.44□□□□□ -0.26
SHOX-202ENST00000381575 DRC3Q9H069 523 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 TRMT6Q9UJA5 497 aaKnown RBP13.44□□□□□ -0.26
SHOX-202ENST00000381575 CDC14AQ9UNH5 594 aa13.44□□□□□ -0.26
SHOX-202ENST00000381575 IGHV1-45A0A0A0MS14 117 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 IGHV3-20A0A0C4DH32 117 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 FEZF1A0PJY2 475 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 OR2W5A6NFC9 320 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 ZBTB14O43829 449 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 DDAH2O95865 285 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 ENO3P13929 434 aaPredicted RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 HSD17B2P37059 387 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 SKIV2L2P42285 1042 aaKnown RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 TSFMP43897 325 aaKnown RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 PPP1R7Q15435 360 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 MSS51Q4VC12 460 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 RNASEH2BQ5TBB1 312 aaKnown RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 ARMC3Q5W041 872 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 B3GNTL1Q67FW5 361 aaPredicted RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 NDUFAF7Q7L592 441 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 PPIL6Q8IXY8 311 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 FBXO15Q8NCQ5 510 aaPredicted RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 OR1N1Q8NGS0 311 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 ZCCHC10Q8TBK6 192 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 PSMF1Q92530 271 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 VPS50Q96JG6 964 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 MAGEB10Q96LZ2 347 aaPredicted RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 C5orf34Q96MH7 638 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 ATG10Q9H0Y0 220 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
SHOX-202ENST00000381575 AGPAT4Q9NRZ5 378 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 HCN3Q9P1Z3 774 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 MKL2Q9ULH7 1088 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 SLC5A6Q9Y289 635 aa13.43□□□□□ -0.26
SHOX-202ENST00000381575 PRPF4O43172 522 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHOX-202ENST00000381575 NRDCO43847 1150 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 ITGAMP11215 1152 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 IL1RNP18510 177 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 CXCR2P25025 360 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 GABRB3P28472 473 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 ST13P50502 369 aaKnown RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 EMP3P54852 163 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 CDKN2DP55273 166 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 ARG2P78540 354 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 ABATP80404 500 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 DHX9Q08211 1270 aaKnown RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 PCOLCEQ15113 449 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 TLR1Q15399 786 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 HP1BP3Q5SSJ5 553 aaPredicted RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 MFSD4BQ5TF39 518 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 GARNL3Q5VVW2 1013 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 LANCL3Q6ZV70 420 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 MAMDC2Q7Z304 686 aaPredicted RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 IGDCC3Q8IVU1 814 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 ST6GALNAC3Q8NDV1 305 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 CALML6Q8TD86 181 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 MVB12AQ96EY5 273 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 CCDC138Q96M89 665 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 PWWP2AQ96N64 755 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 NAP1L3Q99457 506 aaPredicted RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 FAM167BQ9BTA0 163 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 DDX47Q9H0S4 455 aaKnown RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 MKKSQ9NPJ1 570 aaPredicted RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 C14orf105Q9NVL8 296 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 UTP6Q9NYH9 597 aaKnown RBP13.42□□□□□ -0.26
SHOX-202ENST00000381575 KLHL42Q9P2K6 505 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 ASIC3Q9UHC3 531 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 PDE10AQ9Y233 779 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 OSGIN2Q9Y236 505 aa13.42□□□□□ -0.26
SHOX-202ENST00000381575 SGK494L7N484 410 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 SEC24DO94855 1032 aaPredicted RBP13.41□□□□□ -0.26
SHOX-202ENST00000381575 PGAM1P18669 254 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 SOX11P35716 441 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 BCL6P41182 706 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 FNTAP49354 379 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 NAE1Q13564 534 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 PHKG1Q16816 387 aa13.41□□□□□ -0.26
SHOX-202ENST00000381575 BBS9Q3SYG4 887 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms