RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CKMT1AP12532 417 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TNFSF8P32971 234 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 PBX3P40426 434 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 HNF4AP41235 474 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 SLC19A1P41440 591 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 RUNX1T1Q06455 604 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 GTF2H2Q13888 395 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 ARHGEF7Q14155 803 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 PARP15Q460N3 678 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 RTP2Q5QGT7 225 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 GTF2H2CQ6P1K8 395 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TAS1R1Q7RTX1 841 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 AADATQ8N5Z0 425 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 RHEBL1Q8TAI7 183 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TMEM39AQ9NV64 488 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 SRRDQ9UH36 339 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 ERVH48-1M5A8F1 160 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 SCAMP3O14828 347 aaKnown RBP13.43□□□□□ -0.26
SDC1-202ENST00000381150 PRAMEF11O60813 436 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 RAMP2O60895 175 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 YES1P07947 543 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 SLC11A1P49279 550 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 CYP4F8P98187 520 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 IL18R1Q13478 541 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 PTCHD3Q3KNS1 767 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 Q5BKY6 102 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 XKR7Q5GH72 579 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TMPRSS11AQ6ZMR5 421 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 GOLGA7Q7Z5G4 137 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TMEM173Q86WV6 379 aaPredicted RBP13.43□□□□□ -0.26
SDC1-202ENST00000381150 UBQLNLQ8IYU4 475 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 OR8J3Q8NGG0 315 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 WDR36Q8NI36 951 aaKnown RBP13.43□□□□□ -0.26
SDC1-202ENST00000381150 GTPBP3Q969Y2 492 aaKnown RBP13.43□□□□□ -0.26
SDC1-202ENST00000381150 HHIPL1Q96JK4 782 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 EBPLQ9BY08 206 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 ABCB8Q9NUT2 735 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 ABT1Q9ULW3 272 aaKnown RBP13.43□□□□□ -0.26
SDC1-202ENST00000381150 ITM2BQ9Y287 266 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 ARIH1Q9Y4X5 557 aaPredicted RBP13.43□□□□□ -0.26
SDC1-202ENST00000381150 HSPB11Q9Y547 144 aa13.43□□□□□ -0.26
SDC1-202ENST00000381150 TRAV19A0A0A6YYK7 116 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 PCP4L1A6NKN8 68 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 E2F3O00716 465 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 AKR7A2O43488 359 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 OR1E1P30953 314 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 CDKN2CP42773 168 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 KCNQ1P51787 676 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 YBEYP58557 167 aaPredicted RBP13.42□□□□□ -0.26
SDC1-202ENST00000381150 PDZK1Q5T2W1 519 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 ALG1LQ6GMV1 187 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 PSAPL1Q6NUJ1 521 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 NOXA1Q86UR1 476 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 CCDC71Q8IV32 467 aaPredicted RBP13.42□□□□□ -0.26
SDC1-202ENST00000381150 CCDC28AQ8IWP9 274 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 PIANPQ8IYJ0 282 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 ENTHD1Q8IYW4 607 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DTX3Q8N9I9 347 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 ENKURQ8TC29 256 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 ST6GAL2Q96JF0 529 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 OR5M11Q96RB7 305 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 NUSAP1Q9BXS6 441 aaKnown RBP13.42□□□□□ -0.26
SDC1-202ENST00000381150 AASDHPPTQ9NRN7 309 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 SIRT5Q9NXA8 310 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 FKBPLQ9UIM3 349 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 A0A1W2PQ09 198 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 LCHNA4D1U4 455 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 TEX28O15482 410 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 OR1E2P47887 323 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 NFE2L1Q14494 772 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 BAK1Q16611 211 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 INO80DQ53TQ3 878 aaPredicted RBP13.42□□□□□ -0.26
SDC1-202ENST00000381150 MBOAT1Q6ZNC8 495 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 GLCCI1Q86VQ1 547 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DPP10Q8N608 796 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DBF4BQ8NFT6 615 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 MYDGFQ969H8 173 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 EGLN2Q96KS0 407 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 SNX18Q96RF0 628 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 UCK2Q9BZX2 261 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DYRK4Q9NR20 520 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 PCDHGC4Q9Y5F7 938 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 CLDN24A6NM45 220 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 ANKRD28O15084 1053 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 RGS14O43566 566 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 SCO2O43819 266 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 WBP4O75554 376 aaKnown RBP13.42□□□□□ -0.26
SDC1-202ENST00000381150 ATF6P18850 670 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 SLC6A4P31645 630 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 PIK3CBP42338 1070 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 MAPKAPK2P49137 400 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 DUSP4Q13115 394 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 IRF3Q14653 427 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 SPATS1Q496A3 300 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 OR4F3Q6IEY1 312 aa13.42□□□□□ -0.26
SDC1-202ENST00000381150 SHQ1Q6PI26 577 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms