RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 NUDT16L1Q9BRJ7 211 aaKnown RBP10.46□□□□□ -0.73
NEDD9-201ENST00000379433 SLC32A1Q9H598 525 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 COQ10BQ9H8M1 238 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 SERGEFQ9UGK8 458 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 SCOCQ9UIL1 159 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 SNX6Q9UNH7 406 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 FAF1Q9UNN5 650 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-201ENST00000379433 ASF1AQ9Y294 204 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 KIAA1671Q9BY89 1806 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 OBSL1O75147 1896 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 A0A1W2PP18 115 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 FXYD1O00168 92 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 PRAMEF4O60810 478 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 ATG13O75143 517 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 CISD3P0C7P0 127 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 ADRB3P13945 408 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 ACADSP16219 412 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 PORP16435 677 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-201ENST00000379433 CSNK1DP48730 415 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 VBP1P61758 197 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 IL1RL1Q01638 556 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 HERC3Q15034 1050 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.46□□□□□ -0.73
NEDD9-201ENST00000379433 CACHD1Q5VU97 1274 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 PRAMEF9Q5VWM5 478 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 LYPLAL1Q5VWZ2 237 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 BORAQ6PGQ7 559 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 CLEC2AQ6UVW9 174 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 ADCK2Q7Z695 626 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 AKAP14Q86UN6 197 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 NUS1Q96E22 293 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 FRMD6Q96NE9 622 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 CENPKQ9BS16 269 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 LGR4Q9BXB1 951 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 SPEF1Q9Y4P9 236 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 SNX8Q9Y5X2 465 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 U3KQV3 271 aa10.46□□□□□ -0.73
NEDD9-201ENST00000379433 ZFC3H1O60293 1989 aaKnown RBP10.46□□□□□ -0.74
NEDD9-201ENST00000379433 A0A0G2JN53 185 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 GNG14A0A1W2PPG7 69 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 OR5K4A6NMS3 321 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 MAP3K13O43283 966 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 KAT7O95251 611 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 KRT6AP02538 564 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 KRT6BP04259 564 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 RPS3P23396 243 aaKnown RBP eCLIP10.46□□□□□ -0.74
NEDD9-201ENST00000379433 GJA4P35212 333 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 KRT6CP48668 564 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 PCBP2Q15366 365 aaKnown RBP eCLIP10.46□□□□□ -0.743e-6■■■■□ 20.8
NEDD9-201ENST00000379433 CATSPEREQ5SY80 951 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 C9orf64Q5T6V5 341 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 VITQ6UXI7 678 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 TERB1Q8NA31 727 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 PDPRQ8NCN5 879 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.74
NEDD9-201ENST00000379433 CXorf40AQ8TE69 158 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 ASB11Q8WXH4 323 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 SLC29A1Q99808 456 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 EHD1Q9H4M9 534 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 ZDHHC7Q9NXF8 308 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 VAPAQ9P0L0 249 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 CLEC4AQ9UMR7 237 aa10.46□□□□□ -0.74
NEDD9-201ENST00000379433 ARPC2O15144 300 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 POP7O75817 140 aaKnown RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 TGFB1P01137 390 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 PRNPP04156 253 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CTRB1P17538 263 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 IGFBP4P22692 258 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ADSLP30566 484 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 MMP12P39900 470 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CTRB2Q6GPI1 263 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 AAGABQ6PD74 315 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 AGTRAPQ6RW13 159 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 PLD3Q8IV08 490 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 APLFQ8IW19 511 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CADM3Q8N126 398 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 CBARPQ8N350 705 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ANKRD53Q8N9V6 530 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 MED30Q96HR3 178 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 FOPNLQ96NB1 174 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ZSCAN5AQ9BUG6 496 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ACTL8Q9H568 366 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SLC6A13Q9NSD5 602 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 THG1LQ9NWX6 298 aaKnown RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 BCAP29Q9UHQ4 241 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 LEF1Q9UJU2 399 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 NINQ8N4C6 2090 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 SPTBP11277 2137 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 A8MVJ9 347 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 KLK8O60259 260 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 FGF19O95750 216 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 RETP07949 1114 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 BCKDHAP12694 445 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 AQP1P29972 269 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 GSTA3Q16772 222 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 HNRNPA1L2Q32P51 320 aaKnown RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ZIK1Q3SY52 487 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 HENMT1Q5T8I9 393 aaKnown RBP10.45□□□□□ -0.74
NEDD9-201ENST00000379433 B3GNT6Q6ZMB0 384 aa10.45□□□□□ -0.74
NEDD9-201ENST00000379433 ZBTB49Q6ZSB9 765 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms