RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CLGNO14967 610 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 ZSCAN9O15535 394 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 DLX3O60479 287 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 PLIN3O60664 434 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 RAD1O60671 282 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 CPNE3O75131 537 aaKnown RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 H2AFYO75367 372 aaKnown RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 SIX3O95343 332 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 PROCP04070 461 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 HBQ1P09105 142 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 BCL6P41182 706 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 EMP3P54852 163 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 REEP5Q00765 189 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 CASP8Q14790 479 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 GRM7Q14831 915 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 TBCCQ15814 346 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 PRTGQ2VWP7 1150 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 YOD1Q5VVQ6 348 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 C6orf15Q6UXA7 325 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 TMPRSS11BQ86T26 416 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 SRRM1Q8IYB3 904 aaKnown RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 NLGN4XQ8N0W4 816 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 ZNF655Q8N720 491 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 MFSD9Q8NBP5 474 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 ZNF740Q8NDX6 193 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 NLGN4YQ8NFZ3 816 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 NKD1Q969G9 470 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 TM4SF19Q96DZ7 209 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 PGM2Q96G03 612 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 CNTNAP3BQ96NU0 1288 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 AIF1LQ9BQI0 150 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 C1QTNF3Q9BXJ4 246 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 CNTNAP3Q9BZ76 1288 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 PITHD1Q9GZP4 211 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 SPNS1Q9H2V7 528 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 NT5DC2Q9H857 520 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 ACTR5Q9H9F9 607 aaPredicted RBP17.91■□□□□ 0.46
SSU72-203ENST00000378725 SENP1Q9P0U3 644 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 COPG2Q9UBF2 871 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 SSUH2Q9Y2M2 353 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 PCDHGA4Q9Y5G9 962 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 WDFY3Q8IZQ1 3526 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 G3V2L1 256 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 TXNDC9O14530 226 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 WFS1O76024 890 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 EPB42P16452 691 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 ATP5F1P24539 256 aaPredicted RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 CXCR2P25025 360 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 VARSP26640 1264 aaKnown RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 EEF1DP29692 281 aaKnown RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 RORAP35398 523 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 SCTRP47872 440 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 ARSFP54793 590 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 MEF2AQ02078 507 aaPredicted RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 CLN3Q13286 438 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 RHBDD2Q6NTF9 364 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 ZNF517Q6ZMY9 492 aaPredicted RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 VN1R4Q7Z5H5 301 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 ESX1Q8N693 406 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 TEX9Q8N6V9 391 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 GALNT6Q8NCL4 622 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 RERGQ96A58 199 aaPredicted RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 PTCD3Q96EY7 689 aaKnown RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 APOPT1Q96IL0 206 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 STARD5Q9NSY2 213 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 GEMIN8Q9NWZ8 242 aaKnown RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 SRPK3Q9UPE1 567 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 RAXQ9Y2V3 346 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 PLLPQ9Y342 182 aa17.9■□□□□ 0.46
SSU72-203ENST00000378725 SNRNP200O75643 2136 aaKnown RBP17.9■□□□□ 0.46
SSU72-203ENST00000378725 TEX51A0A1B0GUA7 166 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 OR1F1O43749 312 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 EIF2S1P05198 315 aaKnown RBP17.89■□□□□ 0.45
SSU72-203ENST00000378725 RPS17P08708 135 aaKnown RBP17.89■□□□□ 0.45
SSU72-203ENST00000378725 CREB1P16220 341 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 PIK3CGP48736 1102 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 PRKAA2P54646 552 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 ABHD18Q0P651 414 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 GTF2H2Q13888 395 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 DOC2AQ14183 400 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 TGIF1Q15583 401 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 FAM214AQ32MH5 1076 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 XKR6Q5GH73 641 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 MANEAQ5SRI9 462 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 ZNF385CQ66K41 422 aaPredicted RBP17.89■□□□□ 0.45
SSU72-203ENST00000378725 GTF2H2CQ6P1K8 395 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 ZYG11AQ6WRX3 759 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 GOLGA7Q7Z5G4 137 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 EXOC3L1Q86VI1 746 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 SLC22A9Q8IVM8 553 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 CACNA2D3Q8IZS8 1091 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 DSELQ8IZU8 1212 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 ARHGEF39Q8N4T4 335 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 TBC1D19Q8N5T2 526 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 CSNK1A1LQ8N752 337 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 TTC29Q8NA56 475 aaPredicted RBP17.89■□□□□ 0.45
SSU72-203ENST00000378725 KCNE4Q8WWG9 221 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 CLIP3Q96DZ5 547 aa17.89■□□□□ 0.45
SSU72-203ENST00000378725 RNF31Q96EP0 1072 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms